RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 ANKRD33BA6NCL7 494 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 A6NNC1 897 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 HSPB2A8KAH6 182 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 FAM47E-STBD1D6RA91 191 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 SYT5O00445 386 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 RIPK2O43353 540 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 UGDHO60701 494 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 SEMA3DO95025 777 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 NUDT17P0C025 328 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 GALNSP34059 522 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 SOX18P35713 384 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 ASCL1P50553 236 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 CDK9P50750 372 aaKnown RBP13.42□□□□□ -0.26
IRF3-223ENST00000599223 PHEXP78562 749 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 FUT7Q11130 342 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 TRAF3Q13114 568 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 BIKQ13323 160 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 HSPB2Q16082 182 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 FBXL19-AS1Q494R0 122 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 FLYWCH1Q4VC44 716 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 EIPR1Q53HC9 387 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 CEP85LQ5SZL2 805 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 CDC20BQ86Y33 519 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 TGIF2LYQ8IUE0 185 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 TAGAPQ8N103 731 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 SIMC1Q8NDZ2 872 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 C7orf57Q8NEG2 295 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 GNRHR2Q96P88 292 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 ANGPTL4Q9BY76 406 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 PRDM14Q9GZV8 571 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 CDC42EP4Q9H3Q1 356 aaKnown RBP13.42□□□□□ -0.26
IRF3-223ENST00000599223 NPFFR2Q9Y5X5 522 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 MED12LQ86YW9 2145 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 A0A087WUV0 522 aaPredicted RBP13.41□□□□□ -0.26
IRF3-223ENST00000599223 FOXE1O00358 373 aaPredicted RBP13.41□□□□□ -0.26
IRF3-223ENST00000599223 DVL2O14641 736 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 TRAPPC6AO75865 159 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 KLHL2O95198 593 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 ACSL3O95573 720 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 EPPINO95925 133 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 HPNP05981 417 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 CD99P14209 185 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 S1PR1P21453 382 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 GPX3P22352 226 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 TACR1P25103 407 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 DUSP2Q05923 314 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 FOXD4Q12950 439 aaPredicted RBP13.41□□□□□ -0.26
IRF3-223ENST00000599223 ACAP2Q15057 778 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 FAM83EQ2M2I3 478 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 KRTAP21-3Q3LHN1 58 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 TBCELQ5QJ74 424 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 RPS27LQ71UM5 84 aaKnown RBP13.41□□□□□ -0.26
IRF3-223ENST00000599223 LACC1Q8IV20 430 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 PTGR2Q8N8N7 351 aaPredicted RBP13.41□□□□□ -0.26
IRF3-223ENST00000599223 RNASE6Q93091 150 aaKnown RBP13.41□□□□□ -0.26
IRF3-223ENST00000599223 TP53INP1Q96A56 240 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 REPS1Q96D71 796 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 RMND5BQ96G75 393 aaPredicted RBP13.41□□□□□ -0.26
IRF3-223ENST00000599223 UGT2B28Q9BY64 529 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 MRPL1Q9BYD6 325 aaKnown RBP13.41□□□□□ -0.26
IRF3-223ENST00000599223 NXF5Q9H1B4 397 aaKnown RBP13.41□□□□□ -0.26
IRF3-223ENST00000599223 OR10A5Q9H207 317 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 NOL11Q9H8H0 719 aaKnown RBP13.41□□□□□ -0.26
IRF3-223ENST00000599223 WDR41Q9HAD4 459 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 ZBTB26Q9HCK0 441 aa13.41□□□□□ -0.26
IRF3-223ENST00000599223 KLK1P06870 262 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 ABHD2P08910 425 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 HOXB4P17483 251 aaPredicted RBP13.4□□□□□ -0.26
IRF3-223ENST00000599223 BMP7P18075 431 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 KLK2P20151 261 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 PIK3R1P27986 724 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 ABCD3P28288 659 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 PTPN6P29350 595 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 TIMP3P35625 211 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 PTGDSP41222 190 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 CASP3P42574 277 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 MASP1P48740 699 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 SERPINB8P50452 374 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 AGFG1P52594 562 aaKnown RBP13.4□□□□□ -0.26
IRF3-223ENST00000599223 MGAT2Q10469 447 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 SLC29A2Q14542 456 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 UAP1Q16222 522 aaPredicted RBP13.4□□□□□ -0.26
IRF3-223ENST00000599223 KRT71Q3SY84 523 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 WIPI1Q5MNZ9 446 aaPredicted RBP13.4□□□□□ -0.26
IRF3-223ENST00000599223 NSUN5P2Q63ZY6 315 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 TMEM198Q66K66 360 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 VASNQ6EMK4 673 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 WDYHV1Q96HA8 205 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 ITPAQ9BY32 194 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 ROPN1BQ9BZX4 212 aaPredicted RBP13.4□□□□□ -0.26
IRF3-223ENST00000599223 CENPHQ9H3R5 247 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 PPCSQ9HAB8 311 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 ROPN1Q9HAT0 212 aaPredicted RBP13.4□□□□□ -0.26
IRF3-223ENST00000599223 DLL4Q9NR61 685 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 FARSBQ9NSD9 589 aaKnown RBP13.4□□□□□ -0.26
IRF3-223ENST00000599223 NINJ2Q9NZG7 142 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 PCTPQ9UKL6 214 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 CAMK2AQ9UQM7 478 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 IKBKGQ9Y6K9 419 aa13.4□□□□□ -0.26
IRF3-223ENST00000599223 DNHD1Q96M86 4753 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms