RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 R3HCC1LQ7Z5L2 792 aaKnown RBP18.7■□□□□ 0.58
IRF3-221ENST00000598808 FAM9CQ8IZT9 166 aa18.7■□□□□ 0.58
IRF3-221ENST00000598808 VWA5B2Q8N398 1253 aa18.7■□□□□ 0.58
IRF3-221ENST00000598808 LSM14AQ8ND56 463 aaKnown RBP18.7■□□□□ 0.58
IRF3-221ENST00000598808 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.7■□□□□ 0.587e-6■■■■□ 22
IRF3-221ENST00000598808 ZNF721Q8TF20 911 aa18.7■□□□□ 0.58
IRF3-221ENST00000598808 PSMF1Q92530 271 aa18.7■□□□□ 0.58
IRF3-221ENST00000598808 FBXL20Q96IG2 436 aa18.7■□□□□ 0.58
IRF3-221ENST00000598808 LIN28AQ9H9Z2 209 aaKnown RBP18.7■□□□□ 0.58
IRF3-221ENST00000598808 CXorf21Q9HAI6 301 aa18.7■□□□□ 0.58
IRF3-221ENST00000598808 BCAP29Q9UHQ4 241 aa18.7■□□□□ 0.58
IRF3-221ENST00000598808 PCDHGB7Q9Y5F8 929 aa18.7■□□□□ 0.58
IRF3-221ENST00000598808 CFAP46Q8IYW2 2715 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 LOC100653049A0A140TA62 436 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 DYTNA2CJ06 578 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 SCAMP2O15127 329 aaKnown RBP18.69■□□□□ 0.58
IRF3-221ENST00000598808 C1QL1O75973 258 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 KRT34O76011 436 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 ATP6V1G2O95670 118 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 CT62P0C5K7 136 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 SSTR4P31391 388 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 MPIP34949 423 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 SOX11P35716 441 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 RPL3P39023 403 aaKnown RBP18.69■□□□□ 0.58
IRF3-221ENST00000598808 DIO3P55073 304 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 MRPS35P82673 323 aaKnown RBP18.69■□□□□ 0.58
IRF3-221ENST00000598808 SLC29A4Q7RTT9 530 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 RPS19BP1Q86WX3 136 aaKnown RBP18.69■□□□□ 0.58
IRF3-221ENST00000598808 BEST3Q8N1M1 668 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 MIER2Q8N344 545 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 KRTCAP2Q8N6L1 136 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 POU5F2Q8N7G0 328 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 TEX19Q8NA77 164 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 CIDECQ96AQ7 238 aaPredicted RBP18.69■□□□□ 0.58
IRF3-221ENST00000598808 MARK4Q96L34 752 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.69■□□□□ 0.583e-7■■■□□ 17.6
IRF3-221ENST00000598808 SDR39U1Q9NRG7 319 aaPredicted RBP18.69■□□□□ 0.58
IRF3-221ENST00000598808 ANKRD10Q9NXR5 420 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 STMN3Q9NZ72 180 aa18.69■□□□□ 0.58
IRF3-221ENST00000598808 ZNF223Q9UK11 482 aaPredicted RBP18.69■□□□□ 0.58
IRF3-221ENST00000598808 EXO1Q9UQ84 846 aaKnown RBP18.69■□□□□ 0.58
IRF3-221ENST00000598808 PRKNO60260 465 aaPredicted RBP18.68■□□□□ 0.58
IRF3-221ENST00000598808 MAN1A2O60476 641 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 ATP1B1P05026 303 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 EFNA1P20827 205 aaPredicted RBP18.68■□□□□ 0.58
IRF3-221ENST00000598808 GALNSP34059 522 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 GPC1P35052 558 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 HSPB3Q12988 150 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 RPS6KA2Q15349 733 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 PRSS53Q2L4Q9 553 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 TRMT5Q32P41 509 aaKnown RBP18.68■□□□□ 0.58
IRF3-221ENST00000598808 COQ5Q5HYK3 327 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 FAM111BQ6SJ93 734 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 NET1Q7Z628 596 aaPredicted RBP18.68■□□□□ 0.58
IRF3-221ENST00000598808 KAT2AQ92830 837 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 ZNF681Q96N22 645 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 PRPF18Q99633 342 aaKnown RBP18.68■□□□□ 0.58
IRF3-221ENST00000598808 DPY30Q9C005 99 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 LUZP4Q9P127 313 aa18.68■□□□□ 0.58
IRF3-221ENST00000598808 PPIEQ9UNP9 301 aaKnown RBP18.68■□□□□ 0.58
IRF3-221ENST00000598808 GABRR3A8MPY1 467 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 SNRPB2P08579 225 aaKnown RBP18.67■□□□□ 0.58
IRF3-221ENST00000598808 CASRP41180 1078 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 OC90Q02509 493 aaPredicted RBP18.67■□□□□ 0.58
IRF3-221ENST00000598808 EXOSC7Q15024 291 aaKnown RBP18.67■□□□□ 0.58
IRF3-221ENST00000598808 PGS1Q32NB8 556 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 ZNF385BQ569K4 471 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 CPTPQ5TA50 214 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 HLA-DQA1Q5Y7H0 255 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 HACD2Q6Y1H2 254 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 SZRD1Q7Z422 152 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 ULK2Q8IYT8 1036 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 OR7A2PQ8NGA2 310 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 OR5L2Q8NGL0 311 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 ZFP28Q8NHY6 868 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 MAGED4Q96JG8 741 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 ASIC5Q9NY37 505 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 MAT2BQ9NZL9 334 aa18.67■□□□□ 0.58
IRF3-221ENST00000598808 HEMK1Q9Y5R4 338 aaPredicted RBP18.67■□□□□ 0.58
IRF3-221ENST00000598808 WWP2O00308 870 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 WDPCPO95876 746 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 PRPS1L1P21108 318 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 GPX3P22352 226 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 CD97P48960 835 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 GPR143P51810 404 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 RNF4P78317 190 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 ART3Q13508 389 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 PRICKLE4Q2TBC4 344 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 PDCD4Q53EL6 469 aaKnown RBP18.66■□□□□ 0.58
IRF3-221ENST00000598808 TMEM107Q6UX40 140 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 C16orf47Q6ZP98 133 aaPredicted RBP18.66■□□□□ 0.58
IRF3-221ENST00000598808 C9orf40Q8IXQ3 194 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 PGAM4Q8N0Y7 254 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 MTERF3Q96E29 417 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 LMF1Q96S06 567 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 NPAS2Q99743 824 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 THTPAQ9BU02 230 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 ATAD3AQ9NVI7 634 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 AIG1Q9NVV5 245 aa18.66■□□□□ 0.58
IRF3-221ENST00000598808 ZIM2Q9NZV7 527 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms