RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 EHD3Q9NZN3 535 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 XPR1Q9UBH6 696 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 PCTPQ9UKL6 214 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 PCDHGB3Q9Y5G1 929 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 FAM221AA4D161 298 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 ANKRD33BA6NCL7 494 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 A6NNC1 897 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 FAM47E-STBD1D6RA91 191 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 FOXE1O00358 373 aaPredicted RBP11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 DVL2O14641 736 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 TP53I11O14683 189 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 SEMA3DO95025 777 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 CD99P14209 185 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 CPMP14384 443 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 BMP7P18075 431 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 TSPAN8P19075 237 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 S1PR1P21453 382 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 PTPN6P29350 595 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 TYK2P29597 1187 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 PTGDSP41222 190 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 SLCO1A2P46721 670 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 XKP51811 444 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 CCNG1P51959 295 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 LTB4RQ15722 352 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 SGO1Q5FBB7 561 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 TBCELQ5QJ74 424 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 FRG2Q64ET8 278 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 VASNQ6EMK4 673 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 KLC3Q6P597 504 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 ANGPTL8Q6UXH0 198 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 YRDCQ86U90 279 aaKnown RBP11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 TGIF2LYQ8IUE0 185 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 LACC1Q8IV20 430 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 ADCY4Q8NFM4 1077 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 OR4F6Q8NGB9 312 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 OR4K14Q8NGD5 310 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 RNASE6Q93091 150 aaKnown RBP11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 ATP6V1E2Q96A05 226 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 TP53INP1Q96A56 240 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 WDYHV1Q96HA8 205 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 FRG2BQ96QU4 278 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 NODALQ96S42 347 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 HBEGFQ99075 208 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 SERPINI1Q99574 410 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 LRRC1Q9BTT6 524 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 BRINP2Q9C0B6 783 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 EPB41L4BQ9H329 900 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 SLC24A3Q9HC58 644 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 GALNT9Q9HCQ5 603 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 MAT2BQ9NZL9 334 aa11.05□□□□□ -0.64
SOX2-OT-228ENST00000597828 PRR14LQ5THK1 2151 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 CAPN14A8MX76 684 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 AHRRA9YTQ3 701 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 SYT5O00445 386 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 PPP6CO00743 305 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 NME6O75414 186 aaPredicted RBP11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 ABCB1P08183 1280 aaPredicted RBP11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 KLK2P20151 261 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 CNTFP26441 200 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 TIMP3P35625 211 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 FEN1P39748 380 aaKnown RBP11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 MAGEA12P43365 314 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 TMED10P49755 219 aaKnown RBP11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 NAGLUP54802 743 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 MGAT2Q10469 447 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 FOXD4Q12950 439 aaPredicted RBP11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 PRICKLE4Q2TBC4 344 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 FBXL19-AS1Q494R0 122 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 TCHHL1Q5QJ38 904 aaPredicted RBP11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 CCNYL2Q5T2Q4 361 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 TTC19Q6DKK2 380 aaPredicted RBP11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 PACS2Q86VP3 889 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 VWA5B2Q8N398 1253 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 C9orf106Q8NAJ2 232 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 FAM83FQ8NEG4 500 aaPredicted RBP11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 LINC01560Q8TB33 94 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 NINJ1Q92982 152 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 HGDQ93099 445 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 NTNG2Q96CW9 530 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 OMA1Q96E52 524 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 HSPBAP1Q96EW2 488 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 TMEM41AQ96HV5 264 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 ANKRA2Q9H9E1 313 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 PSD3Q9NYI0 1048 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 BCAP29Q9UHQ4 241 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 CES1P1Q9UKY3 287 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 SLC12A4Q9UP95 1085 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 MAPRE3Q9UPY8 281 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 TNPO3Q9Y5L0 923 aaKnown RBP11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 ARID1AO14497 2285 aa11.04□□□□□ -0.64
SOX2-OT-228ENST00000597828 MBD3L4A6NDZ8 208 aaPredicted RBP11.03□□□□□ -0.64
SOX2-OT-228ENST00000597828 MBD3L3A6NE82 208 aaPredicted RBP11.03□□□□□ -0.64
SOX2-OT-228ENST00000597828 MBD3L5A6NJ08 208 aaPredicted RBP11.03□□□□□ -0.64
SOX2-OT-228ENST00000597828 EEF1E1-BLOC1S5C9J1V9 151 aa11.03□□□□□ -0.64
SOX2-OT-228ENST00000597828 EEF1E1O43324 174 aaKnown RBP11.03□□□□□ -0.64
SOX2-OT-228ENST00000597828 UGT2B11O75310 529 aa11.03□□□□□ -0.64
SOX2-OT-228ENST00000597828 ERAL1O75616 437 aaKnown RBP11.03□□□□□ -0.64
SOX2-OT-228ENST00000597828 PPM1BO75688 479 aa11.03□□□□□ -0.64
SOX2-OT-228ENST00000597828 SNX4O95219 450 aa11.03□□□□□ -0.64
SOX2-OT-228ENST00000597828 CBX7O95931 251 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms