RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 HTR6P50406 440 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 DCAF7P61962 342 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 RAE1P78406 368 aaKnown RBP16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 CCDC153Q494R4 210 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 FAM219BQ5XKK7 198 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 TMEM198Q66K66 360 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 TMEM81Q6P7N7 255 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 FAM111BQ6SJ93 734 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 GSPT2Q8IYD1 628 aaKnown RBP16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 SAMD14Q8IZD0 417 aaPredicted RBP16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 RPRMLQ8N4K4 120 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 OR5M3Q8NGP4 307 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 ZNF675Q8TD23 568 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 DIO2Q92813 273 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 HSPBAP1Q96EW2 488 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 CNRIP1Q96F85 164 aaPredicted RBP16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 SHCBP1LQ9BZQ2 653 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 TRIM8Q9BZR9 551 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 BRINP2Q9C0B6 783 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 HEY2Q9UBP5 337 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 B4GALT7Q9UBV7 327 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 UTS2RQ9UKP6 389 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 GRID1Q9ULK0 1009 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 DLGAP4Q9Y2H0 992 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 PHF3Q92576 2039 aaKnown RBP16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 DNAJC13O75165 2243 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 CACNA1CQ13936 2221 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 ENO4A6NNW6 628 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 ACOX3O15254 700 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 PCDH7O60245 1069 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 BCAS2O75934 225 aaPredicted RBP16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 CBX7O95931 251 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 PROCP04070 461 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 SHBGP04278 402 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 MYL2P10916 166 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 ENDOUP21128 410 aaKnown RBP16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 ABCD3P28288 659 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 CRHR1P34998 444 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 CCT5P48643 541 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 NUP107P57740 925 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 FBXW4P57775 412 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 DNAJB13P59910 316 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 DUSP2Q05923 314 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 ACSM2AQ08AH3 577 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 PMPCAQ10713 525 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 DUSP8Q13202 625 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 HEPACAMQ14CZ8 416 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 WLSQ5T9L3 541 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 ACSM2BQ68CK6 577 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 ZNF585AQ6P3V2 769 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 TMEM64Q6YI46 380 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 SRRM1Q8IYB3 904 aaKnown RBP16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 OR5M9Q8NGP3 310 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 RDH11Q8TC12 318 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 ERP27Q96DN0 273 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 APIPQ96GX9 242 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 ZNF597Q96LX8 424 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 TTYH2Q9BSA4 534 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 NXF5Q9H1B4 397 aaKnown RBP16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 MID1IP1Q9NPA3 183 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 PRODH2Q9UF12 536 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 BCAP29Q9UHQ4 241 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 ACAD8Q9UKU7 415 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 DTX4Q9Y2E6 619 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 TIMM22Q9Y584 194 aa16.45■□□□□ 0.22
CHMP2A-203ENST00000597209 UBFD1O14562 309 aaKnown RBP16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 PLIN3O60664 434 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 PPM1BO75688 479 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 ABCB1P08183 1280 aaPredicted RBP16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 SNRPB2P08579 225 aaKnown RBP16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 IL3P08700 152 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 GABRA1P14867 456 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 KRT15P19012 456 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 DRD5P21918 477 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 TIA1P31483 386 aaKnown RBP eCLIP16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 CASP3P42574 277 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 PPICP45877 212 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 ALDH9A1P49189 494 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 HMGCS1Q01581 520 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 CEBPEQ15744 281 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 TRMT12Q53H54 448 aaKnown RBP16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 RTL6Q6ICC9 239 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 B3GNT6Q6ZMB0 384 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 NUP54Q7Z3B4 507 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 ZNF295-AS1Q8N0V1 137 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 CCNYL1Q8N7R7 359 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 NEIL3Q8TAT5 605 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 C16orf78Q8WTQ4 265 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 UBLCP1Q8WVY7 318 aaPredicted RBP16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 TMEM41AQ96HV5 264 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 LCORQ96JN0 433 aaPredicted RBP16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 EXO5Q9H790 373 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 EHD3Q9NZN3 535 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 SPRR3Q9UBC9 169 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 FAM215AQ9Y5M1 114 aa16.44■□□□□ 0.22
CHMP2A-203ENST00000597209 GNG14A0A1W2PPG7 69 aa16.43■□□□□ 0.22
CHMP2A-203ENST00000597209 TO15178 435 aa16.43■□□□□ 0.22
CHMP2A-203ENST00000597209 SSTR2P30874 369 aa16.43■□□□□ 0.22
CHMP2A-203ENST00000597209 EMDP50402 254 aa16.43■□□□□ 0.22
CHMP2A-203ENST00000597209 EXOSC7Q15024 291 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms