RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 CNRIP1Q96F85 164 aaPredicted RBP21.55■■□□□ 1.04
LSM4-204ENST00000594828 TTYH2Q9BSA4 534 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 ACPTQ9BZG2 426 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 ALKBH4Q9NXW9 302 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 SPRR3Q9UBC9 169 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 HEY2Q9UBP5 337 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 ZNF639Q9UID6 485 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 UTS2RQ9UKP6 389 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 TIMM22Q9Y584 194 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 DNAJC13O75165 2243 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 WDR1O75083 606 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 SNX4O95219 450 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 KRT15P19012 456 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 ENDOUP21128 410 aaKnown RBP21.54■■□□□ 1.04
LSM4-204ENST00000594828 HTR6P50406 440 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 DUSP2Q05923 314 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 EXOSC7Q15024 291 aaKnown RBP21.54■■□□□ 1.04
LSM4-204ENST00000594828 BICRALQ6AI39 1079 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 LIX1Q8N485 282 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 CCNYL1Q8N7R7 359 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 CTHRC1Q96CG8 243 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 ZNF597Q96LX8 424 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 ZNF681Q96N22 645 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 ANGPTL4Q9BY76 406 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 UCK2Q9BZX2 261 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 NXF5Q9H1B4 397 aaKnown RBP21.54■■□□□ 1.04
LSM4-204ENST00000594828 GSTO2Q9H4Y5 243 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 KCNJ16Q9NPI9 418 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 EMCNQ9ULC0 261 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 DTX4Q9Y2E6 619 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 DLGAP4Q9Y2H0 992 aa21.54■■□□□ 1.04
LSM4-204ENST00000594828 GNG14A0A1W2PPG7 69 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 FAM90A27PA6NNH2 459 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 PCDH7O60245 1069 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 GLRA3O75311 464 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 HOXD4P09016 255 aaPredicted RBP21.53■■□□□ 1.04
LSM4-204ENST00000594828 GLI4P10075 376 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 MYL2P10916 166 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 DRD2P14416 443 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 NAGAP17050 411 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 GDF1P27539 372 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 ABCD3P28288 659 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 SSTR2P30874 369 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 RAE1P78406 368 aaKnown RBP21.53■■□□□ 1.04
LSM4-204ENST00000594828 HMGCS1Q01581 520 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 ACSM2AQ08AH3 577 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 TRMT12Q53H54 448 aaKnown RBP21.53■■□□□ 1.04
LSM4-204ENST00000594828 SPIN4Q56A73 249 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 ACSM2BQ68CK6 577 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 RTL6Q6ICC9 239 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 MEX3BQ6ZN04 569 aaKnown RBP21.53■■□□□ 1.04
LSM4-204ENST00000594828 PACS2Q86VP3 889 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 ACBD4Q8NC06 268 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 NEIL3Q8TAT5 605 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 UBLCP1Q8WVY7 318 aaPredicted RBP21.53■■□□□ 1.04
LSM4-204ENST00000594828 APIPQ96GX9 242 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 RILPQ96NA2 401 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 KCNA7Q96RP8 456 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 SLC6A15Q9H2J7 730 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 MID1IP1Q9NPA3 183 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 PFDN4Q9NQP4 134 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 FAM215AQ9Y5M1 114 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 CACNA1CQ13936 2221 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 CREBBPQ92793 2442 aa21.53■■□□□ 1.04
LSM4-204ENST00000594828 NKX2-6A6NCS4 301 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 FOXO6A8MYZ6 492 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 G3V2L1 256 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 SHBGP04278 402 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 ABCB1P08183 1280 aaPredicted RBP21.52■■□□□ 1.04
LSM4-204ENST00000594828 IL3P08700 152 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 GABRA1P14867 456 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 SOX18P35713 384 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 CASP3P42574 277 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 CCT5P48643 541 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 TRPC1P48995 793 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 BTKQ06187 659 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 DUSP8Q13202 625 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 NNATQ16517 81 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 SCIMPQ6UWF3 145 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 ZYG11AQ6WRX3 759 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 SH2D5Q6ZV89 423 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 CCDC116Q8IYX3 515 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 SIMC1Q8NDZ2 872 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 OR52R1Q8NGF1 315 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 HSPBAP1Q96EW2 488 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 LCORQ96JN0 433 aaPredicted RBP21.52■■□□□ 1.04
LSM4-204ENST00000594828 ITPAQ9BY32 194 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 PRODH2Q9UF12 536 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 PLLPQ9Y342 182 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 NINQ8N4C6 2090 aa21.52■■□□□ 1.04
LSM4-204ENST00000594828 PHF3Q92576 2039 aaKnown RBP21.51■■□□□ 1.03
LSM4-204ENST00000594828 SERTM1A2A2V5 107 aa21.51■■□□□ 1.03
LSM4-204ENST00000594828 PPM1BO75688 479 aa21.51■■□□□ 1.03
LSM4-204ENST00000594828 TRAPPC6AO75865 159 aa21.51■■□□□ 1.03
LSM4-204ENST00000594828 TOXO94900 526 aa21.51■■□□□ 1.03
LSM4-204ENST00000594828 CBX7O95931 251 aa21.51■■□□□ 1.03
LSM4-204ENST00000594828 SLCO1A2P46721 670 aa21.51■■□□□ 1.03
LSM4-204ENST00000594828 MASP1P48740 699 aa21.51■■□□□ 1.03
LSM4-204ENST00000594828 NAA20P61599 178 aa21.51■■□□□ 1.03
LSM4-204ENST00000594828 MRPS35P82673 323 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms