RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 AMDHD1Q96NU7 426 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 GLIPR2Q9H4G4 154 aa23.85■■□□□ 1.41
TRIM28-204ENST00000594806 SLC25A12O75746 678 aa23.84■■□□□ 1.41
TRIM28-204ENST00000594806 TGDSO95455 350 aa23.84■■□□□ 1.41
TRIM28-204ENST00000594806 CBX7O95931 251 aa23.84■■□□□ 1.41
TRIM28-204ENST00000594806 SOX18P35713 384 aa23.84■■□□□ 1.41
TRIM28-204ENST00000594806 COLEC12Q5KU26 742 aa23.84■■□□□ 1.41
TRIM28-204ENST00000594806 ADIPOR1Q96A54 375 aa23.84■■□□□ 1.41
TRIM28-204ENST00000594806 MAELQ96JY0 434 aaKnown RBP23.84■■□□□ 1.41
TRIM28-204ENST00000594806 TIMMDC1Q9NPL8 285 aa23.84■■□□□ 1.41
TRIM28-204ENST00000594806 ERVK-11Q9UQG0 969 aa23.84■■□□□ 1.41
TRIM28-204ENST00000594806 COPG1Q9Y678 874 aaKnown RBP23.84■■□□□ 1.41
TRIM28-204ENST00000594806 ZNF462Q96JM2 2506 aa23.84■■□□□ 1.41
TRIM28-204ENST00000594806 CAPN14A8MX76 684 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 SP1P08047 785 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 MLLT10P55197 1068 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 PSPHP78330 225 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 MRPS35P82673 323 aaKnown RBP23.83■■□□□ 1.41
TRIM28-204ENST00000594806 MLC1Q15049 377 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 CPTPQ5TA50 214 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 C16orf47Q6ZP98 133 aaPredicted RBP23.83■■□□□ 1.41
TRIM28-204ENST00000594806 RIMKLAQ8IXN7 391 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 GOLM1Q8NBJ4 401 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 FAM98AQ8NCA5 519 aaKnown RBP23.83■■□□□ 1.41
TRIM28-204ENST00000594806 OR52R1Q8NGF1 315 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 ACTRT2Q8TDY3 377 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 KAT2AQ92830 837 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 COQ8BQ96D53 544 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 SNRNP40Q96DI7 357 aaKnown RBP23.83■■□□□ 1.41
TRIM28-204ENST00000594806 AGPAT4Q9NRZ5 378 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 TAS2R9Q9NYW1 312 aa23.83■■□□□ 1.41
TRIM28-204ENST00000594806 KLF13Q9Y2Y9 288 aaPredicted RBP23.83■■□□□ 1.41
TRIM28-204ENST00000594806 COQ9O75208 318 aa23.82■■□□□ 1.4
TRIM28-204ENST00000594806 RASAL1O95294 804 aa23.82■■□□□ 1.4
TRIM28-204ENST00000594806 GPX3P22352 226 aa23.82■■□□□ 1.4
TRIM28-204ENST00000594806 SOX3P41225 446 aa23.82■■□□□ 1.4
TRIM28-204ENST00000594806 EMDP50402 254 aa23.82■■□□□ 1.4
TRIM28-204ENST00000594806 MANFP55145 182 aaKnown RBP23.82■■□□□ 1.4
TRIM28-204ENST00000594806 NRG3P56975 720 aa23.82■■□□□ 1.4
TRIM28-204ENST00000594806 EXOSC7Q15024 291 aaKnown RBP23.82■■□□□ 1.4
TRIM28-204ENST00000594806 ZNF385BQ569K4 471 aa23.82■■□□□ 1.4
TRIM28-204ENST00000594806 RTL4Q6ZR62 310 aa23.82■■□□□ 1.4
TRIM28-204ENST00000594806 CAMKMTQ7Z624 323 aa23.82■■□□□ 1.4
TRIM28-204ENST00000594806 ZNF227Q86WZ6 799 aa23.82■■□□□ 1.4
TRIM28-204ENST00000594806 CISD2Q8N5K1 135 aaKnown RBP23.82■■□□□ 1.4
TRIM28-204ENST00000594806 DNAJB8Q8NHS0 232 aa23.82■■□□□ 1.4
TRIM28-204ENST00000594806 BARD1Q99728 777 aaKnown RBP23.82■■□□□ 1.4
TRIM28-204ENST00000594806 C19orf53Q9UNZ5 99 aaPredicted RBP23.82■■□□□ 1.4
TRIM28-204ENST00000594806 USH1CQ9Y6N9 552 aa23.82■■□□□ 1.4
TRIM28-204ENST00000594806 ZNF195O14628 629 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 ACOX3O15254 700 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 NME2P1O60361 137 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 OR6B1O95007 311 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 NADKO95544 446 aaPredicted RBP23.81■■□□□ 1.4
TRIM28-204ENST00000594806 PLA2G2AP14555 144 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 DRD5P21918 477 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 NME2P22392 152 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 EPHA3P29320 983 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 PTGER1P34995 402 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 PPICP45877 212 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 NR0B1P51843 470 aaKnown RBP23.81■■□□□ 1.4
TRIM28-204ENST00000594806 DIO3P55073 304 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 FHL5Q5TD97 284 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 ANKRD26P1Q6NSI1 321 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 FAM180AQ6UWF9 173 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 IL20RBQ6UXL0 311 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 OR7G2Q8NG99 324 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 CEP70Q8NHQ1 597 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 CIDECQ96AQ7 238 aaPredicted RBP23.81■■□□□ 1.4
TRIM28-204ENST00000594806 ELP4Q96EB1 424 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 HSPBAP1Q96EW2 488 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 DPY30Q9C005 99 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 BHLHE41Q9C0J9 482 aaPredicted RBP23.81■■□□□ 1.4
TRIM28-204ENST00000594806 SLCO1B3Q9NPD5 702 aa23.81■■□□□ 1.4
TRIM28-204ENST00000594806 CRYABP02511 175 aaKnown RBP23.8■■□□□ 1.4
TRIM28-204ENST00000594806 FBXO45P0C2W1 286 aa23.8■■□□□ 1.4
TRIM28-204ENST00000594806 TMED10P49755 219 aaKnown RBP23.8■■□□□ 1.4
TRIM28-204ENST00000594806 DUSP8Q13202 625 aa23.8■■□□□ 1.4
TRIM28-204ENST00000594806 MAPKAPK3Q16644 382 aa23.8■■□□□ 1.4
TRIM28-204ENST00000594806 OR2L13Q8N349 312 aa23.8■■□□□ 1.4
TRIM28-204ENST00000594806 BCORP1Q8N888 145 aa23.8■■□□□ 1.4
TRIM28-204ENST00000594806 OR7A2PQ8NGA2 310 aa23.8■■□□□ 1.4
TRIM28-204ENST00000594806 MIB2Q96AX9 1013 aa23.8■■□□□ 1.4
TRIM28-204ENST00000594806 SPACA9Q96E40 222 aaPredicted RBP23.8■■□□□ 1.4
TRIM28-204ENST00000594806 LCORQ96JN0 433 aaPredicted RBP23.8■■□□□ 1.4
TRIM28-204ENST00000594806 WDR55Q9H6Y2 383 aaPredicted RBP23.8■■□□□ 1.4
TRIM28-204ENST00000594806 KLHL1Q9NR64 748 aa23.8■■□□□ 1.4
TRIM28-204ENST00000594806 DDX18Q9NVP1 670 aaKnown RBP23.8■■□□□ 1.4
TRIM28-204ENST00000594806 TTC36A6NLP5 189 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 KLRC4-KLRK1H3BQV0 150 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 LAMP1P11279 417 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 NAGAP17050 411 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 GPC1P35052 558 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 MC3RP41968 323 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 ST13P50502 369 aaKnown RBP23.79■■□□□ 1.4
TRIM28-204ENST00000594806 CLNS1AP54105 237 aaKnown RBP23.79■■□□□ 1.4
TRIM28-204ENST00000594806 SRSF11Q05519 484 aaKnown RBP23.79■■□□□ 1.4
TRIM28-204ENST00000594806 DPY19L1Q2PZI1 675 aa23.79■■□□□ 1.4
TRIM28-204ENST00000594806 ZNF791Q3KP31 576 aaPredicted RBP23.79■■□□□ 1.4
TRIM28-204ENST00000594806 LSM12Q3MHD2 195 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms