RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PCDH7O60245 1069 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 FGF17O60258 216 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 CELA2AP08217 269 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 ATP6V1B1P15313 513 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 SLC26A5P58743 744 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 RAE1P78406 368 aaKnown RBP18.31■□□□□ 0.52
LSM4-203ENST00000593829 JMJD6Q6NYC1 403 aaPredicted RBP18.31■□□□□ 0.52
LSM4-203ENST00000593829 GALNT18Q6P9A2 607 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 ASB18Q6ZVZ8 466 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 TWIST2Q8WVJ9 160 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 TM4SF18Q96CE8 201 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 C11orf24Q96F05 449 aaPredicted RBP18.31■□□□□ 0.52
LSM4-203ENST00000593829 TUBB1Q9H4B7 451 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 ADAP2Q9NPF8 381 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 PACSIN3Q9UKS6 424 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 ZNF451Q9Y4E5 1061 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 CCL27Q9Y4X3 112 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 PTGDR2Q9Y5Y4 395 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 COPG1Q9Y678 874 aaKnown RBP18.31■□□□□ 0.52
LSM4-203ENST00000593829 GNG14A0A1W2PPG7 69 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 SAGE2PA6NJ88 616 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 GLOD5A6NK44 160 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 IFNA16P05015 189 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 LINC00032P0C843 101 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 IMPDH2P12268 514 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 TIA1P31483 386 aaKnown RBP eCLIP18.31■□□□□ 0.521e-8■■■□□ 17.7
LSM4-203ENST00000593829 IGLV3-21P80748 117 aaPredicted RBP18.31■□□□□ 0.52
LSM4-203ENST00000593829 ID2Q02363 134 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 BIKQ13323 160 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 MAPRE2Q15555 327 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 AGAP7PQ5VUJ5 663 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 OR4N5Q8IXE1 308 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 DDIASQ8IXT1 998 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 TSPAN14Q8NG11 270 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 METTL2AQ96IZ6 378 aaKnown RBP18.31■□□□□ 0.52
LSM4-203ENST00000593829 AGAP4Q96P64 663 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 NUF2Q9BZD4 464 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 MMP25Q9NPA2 562 aa18.31■□□□□ 0.52
LSM4-203ENST00000593829 RSL24D1Q9UHA3 163 aaKnown RBP18.31■□□□□ 0.52
LSM4-203ENST00000593829 NPIPB8E9PQR5 432 aa18.3■□□□□ 0.52
LSM4-203ENST00000593829 MYO1DO94832 1006 aa18.3■□□□□ 0.52
LSM4-203ENST00000593829 H6PDO95479 791 aa18.3■□□□□ 0.52
LSM4-203ENST00000593829 GPR75O95800 540 aa18.3■□□□□ 0.52
LSM4-203ENST00000593829 PDGFAP04085 211 aa18.3■□□□□ 0.52
LSM4-203ENST00000593829 ITGAMP11215 1152 aa18.3■□□□□ 0.52
LSM4-203ENST00000593829 PRPH2P23942 346 aa18.3■□□□□ 0.52
LSM4-203ENST00000593829 TRIM25Q14258 630 aaKnown RBP18.3■□□□□ 0.52
LSM4-203ENST00000593829 GK3PQ14409 553 aa18.3■□□□□ 0.52
LSM4-203ENST00000593829 ELAVL1Q15717 326 aaKnown RBP18.3■□□□□ 0.52
LSM4-203ENST00000593829 AMER2Q8N7J2 671 aa18.3■□□□□ 0.52
LSM4-203ENST00000593829 FAIM2Q9BWQ8 316 aa18.3■□□□□ 0.52
LSM4-203ENST00000593829 C5AR2Q9P296 337 aa18.3■□□□□ 0.52
LSM4-203ENST00000593829 AP4S1Q9Y587 144 aa18.3■□□□□ 0.52
LSM4-203ENST00000593829 MYOCOSA0A1B0GUC4 107 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 TRIM64CA6NLI5 447 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 WASHC1A8K0Z3 465 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 PGRMC2O15173 223 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 CFLARO15519 480 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 SEC22BO75396 215 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 ANXA4P09525 319 aaPredicted RBP18.29■□□□□ 0.52
LSM4-203ENST00000593829 STX5Q13190 355 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 Q6ZSR9 355 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 CROCCP3Q8IVE0 287 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 TMEM132CQ8N3T6 1108 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 CEP70Q8NHQ1 597 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 DNAJB14Q8TBM8 379 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 BRIX1Q8TDN6 353 aaKnown RBP18.29■□□□□ 0.52
LSM4-203ENST00000593829 LRTM1Q9HBL6 345 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 PNPLA3Q9NST1 481 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 C1orf109Q9NX04 203 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 PCDHA9Q9Y5H5 950 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 CLCA3PQ9Y6N3 262 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 TCRBV3S1A0A5B6 114 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 C1orf226A1L170 272 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 H3BNH8 94 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 PIP5K1BO14986 540 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 PCSK6P29122 969 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 GSTM5P46439 218 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 PSME3P61289 254 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 NR6A1Q15406 480 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 GALNT4Q8N4A0 578 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 NFAM1Q8NET5 270 aaPredicted RBP18.29■□□□□ 0.52
LSM4-203ENST00000593829 B3GNT7Q8NFL0 401 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 OR2T11Q8NH01 316 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 PSMF1Q92530 271 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 UCN3Q969E3 161 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 EME1Q96AY2 570 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 RBM18Q96H35 190 aaKnown RBP18.29■□□□□ 0.52
LSM4-203ENST00000593829 CCT7Q99832 543 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 EBPLQ9BY08 206 aa18.29■□□□□ 0.52
LSM4-203ENST00000593829 DDX18Q9NVP1 670 aaKnown RBP18.29■□□□□ 0.52
LSM4-203ENST00000593829 TUBA8Q9NY65 449 aaPredicted RBP18.29■□□□□ 0.52
LSM4-203ENST00000593829 C7orf72A4D263 438 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 H3BSA7 217 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 ZNF701M0R085 212 aaPredicted RBP18.28■□□□□ 0.52
LSM4-203ENST00000593829 SDHDO14521 159 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 TNNI3P19429 210 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 SLC7A1P30825 629 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 TAS2R50P59544 299 aa18.28■□□□□ 0.52
LSM4-203ENST00000593829 CRB2Q5IJ48 1285 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms