RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 FKBP7Q9Y680 259 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 CSNK1G3Q9Y6M4 447 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 MYH7P12883 1935 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 SHROOM2Q13796 1616 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 CLASP1Q7Z460 1538 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 ZNF608Q9ULD9 1512 aaPredicted RBP3.18□□□□□ -1.9
VMP1-212ENST00000591782 DAPK1P53355 1430 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 FMN1Q68DA7 1419 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 ZNF541Q9H0D2 1346 aa3.18□□□□□ -1.9
VMP1-212ENST00000591782 RTL1A6NKG5 1358 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 MSH6P52701 1360 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 A0A1B0GVG6 124 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 GNG14A0A1W2PPG7 69 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 A0A1W2PQ72 361 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 A0A1W2PRG6 482 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 A0A1W2PRV1 198 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 SH3PXD2BA1X283 911 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 RAB19A4D1S5 217 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 SLC15A5A6NIM6 579 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 OR6C76A6NM76 312 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 SMIM1B2RUZ4 78 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 ATP6V1G2-DDX39BF2Z307 99 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 SH2B2O14492 632 aaPredicted RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 CST8O60676 142 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 HSF2BPO75031 334 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 BCAS2O75934 225 aaPredicted RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 DCTN3O75935 186 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 LYPLA2O95372 231 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 PTBP3O95758 552 aaKnown RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 LGI1O95970 557 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 AMBPP02760 352 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 FABP1P07148 127 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 TPOP07202 933 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 GNAO1P09471 354 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 SBK2P0C263 348 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 OCM2P0CE71 109 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 OCMP0CE72 109 aaPredicted RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 ODC1P11926 461 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 COX4I1P13073 169 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 TNNI3P19429 210 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 PTNP21246 168 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 CCNOP22674 350 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 WARSP23381 471 aaKnown RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 DNASE1P24855 282 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 CD40LGP29965 261 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 CHRNA3P32297 505 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 RCVRNP35243 200 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 HMGCLP35914 325 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 SERPINB5P36952 375 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 CDKN1AP38936 164 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 CEBPDP49716 269 aaPredicted RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 ZNF41P51814 821 aaPredicted RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 CDH13P55290 713 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 RPS18P62269 152 aaKnown RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 REEP5Q00765 189 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 CDH17Q12864 832 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 MERTKQ12866 999 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 BAMBIQ13145 260 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 GPM6BQ13491 265 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 BAATQ14032 418 aaPredicted RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 KRT81Q14533 505 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 PDK1Q15118 436 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 PON3Q15166 354 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 TMED2Q15363 201 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 NPTX1Q15818 432 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 CCDC6Q16204 474 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 SGCAQ16586 387 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 C2CD6Q53TS8 623 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 ZNF311Q5JNZ3 666 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 GLRA4Q5JXX5 417 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 C10orf120Q5SQS8 335 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 SPATA46Q5T0L3 261 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 MPP7Q5T2T1 576 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 GFI1BQ5VTD9 330 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 ELP2Q6IA86 826 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 SPOPLQ6IQ16 392 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 KRT80Q6KB66 452 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 DCLRE1AQ6PJP8 1040 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 RBMS3Q6XE24 437 aaKnown RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 PLEKHG7Q6ZR37 379 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 PEX26Q7Z412 305 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 CAMKMTQ7Z624 323 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 TRPT1Q86TN4 253 aaKnown RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 FAM228AQ86W67 206 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 TMEM173Q86WV6 379 aaPredicted RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 SLC13A5Q86YT5 568 aaPredicted RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 PLD3Q8IV08 490 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 VSTM4Q8IW00 320 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 ENTHD1Q8IYW4 607 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 ZCCHC7Q8N3Z6 543 aaKnown RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 TRAM1L1Q8N609 369 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 CPSF7Q8N684 471 aaKnown RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 LRRC17Q8N6Y2 441 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 ZNF781Q8N8C0 355 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 C12orf29Q8N999 325 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 EIF1ADQ8N9N8 165 aaKnown RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 BHLHE23Q8NDY6 225 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 OR2L3Q8NG85 312 aa3.17□□□□□ -1.9
VMP1-212ENST00000591782 GRAPLQ8TC17 118 aaPredicted RBP3.17□□□□□ -1.9
VMP1-212ENST00000591782 CD300LFQ8TDQ1 290 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms