RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 FAM227AF5H4B4 570 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 SYT5O00445 386 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 SCAMP1O15126 338 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 MAGEB3O15480 346 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 CHRM4P08173 479 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 NR2F6P10588 404 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 GADD45AP24522 165 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 IDUAP35475 653 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 SLC15A1P46059 708 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 CLDN2P57739 230 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 MRPS21P82921 87 aaKnown RBP18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 TIMM50Q3ZCQ8 353 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 ATAD3BQ5T9A4 648 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 TMEM107Q6UX40 140 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 TRIM69Q86WT6 500 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 LACC1Q8IV20 430 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 NLGN4XQ8N0W4 816 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 GJD3Q8N144 294 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 CENPSQ8N2Z9 138 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 OR8J1Q8NGP2 316 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 SLC7A13Q8TCU3 470 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 YIPF4Q9BSR8 244 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 SLIRPQ9GZT3 109 aaKnown RBP18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 RACGAP1Q9H0H5 632 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 MMP27Q9H306 513 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 SLC25A19Q9HC21 320 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 C11orf16Q9NQ32 467 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 PHF11Q9UIL8 331 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 SLC13A4Q9UKG4 626 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 KLK4Q9Y5K2 254 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 A3GALT2U3KPV4 340 aa18.05■□□□□ 0.48
PRKCSH-209ENST00000589838 URADA6NGE7 173 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 M0R3H8 397 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 SLC35G6P0C7Q6 338 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 C8orf89P0DMQ9 161 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 DRD1P21728 446 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 BUD31P41223 144 aaPredicted RBP18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 PIN1Q13526 163 aaPredicted RBP18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 LEXMQ3ZCV2 418 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 PODNL1Q6PEZ8 512 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 RD3Q7Z3Z2 195 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 AMER2Q8N7J2 671 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 DNAJC5GQ8N7S2 189 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 MCFD2Q8NI22 146 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 ELP4Q96EB1 424 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 OR7D2Q96RA2 312 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 KLHL20Q9Y2M5 609 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 RPL36Q9Y3U8 105 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 PMF1-BGLAPU3KQ54 211 aa18.04■□□□□ 0.48
PRKCSH-209ENST00000589838 M0R129 80 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 PTHP01270 115 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 GSTM3P21266 225 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 HNRNPA2B1P22626 353 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 IFNA8P32881 189 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 MAGEA10P43363 369 aaPredicted RBP18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 RGS6P49758 472 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 NCF4Q15080 339 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 INAQ16352 499 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 ZNF554Q86TJ5 538 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 JPH3Q8WXH2 748 aaPredicted RBP18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 KLHL6Q8WZ60 621 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 ZNF681Q96N22 645 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 TRNT1Q96Q11 434 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 DNAAF2Q9NVR5 837 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 RHBDL2Q9NX52 303 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 CLEC1BQ9P126 229 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 ZNF624Q9P2J8 865 aaPredicted RBP18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 DUXAA6NLW8 204 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 ENTPD6O75354 484 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 AGR2O95994 175 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 ALPPP05187 535 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 AK4P27144 223 aaPredicted RBP18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 IFNGR2P38484 337 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 ACTR1BP42025 376 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 ACTR1AP61163 376 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 FUT5Q11128 374 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 SUZ12Q15022 739 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 OCLNQ16625 522 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 ZNF750Q32MQ0 723 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 MINDY2Q8NBR6 621 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 C16orf58Q96GQ5 468 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 IL4I1Q96RQ9 567 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 ACTRT3Q9BYD9 372 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 MCOLN1Q9GZU1 580 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 PRDM9Q9NQV7 894 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 ANKMY1Q9P2S6 941 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 SLC6A14Q9UN76 642 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 IFT52Q9Y366 437 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 PCDHGA3Q9Y5H0 932 aa18.03■□□□□ 0.48
PRKCSH-209ENST00000589838 GSAPA4D1B5 854 aa18.02■□□□□ 0.48
PRKCSH-209ENST00000589838 LRRC72A6NJI9 287 aa18.02■□□□□ 0.48
PRKCSH-209ENST00000589838 BTN3A3O00478 584 aa18.02■□□□□ 0.48
PRKCSH-209ENST00000589838 TNFSF14O43557 240 aa18.02■□□□□ 0.48
PRKCSH-209ENST00000589838 SOX14O95416 240 aa18.02■□□□□ 0.48
PRKCSH-209ENST00000589838 ALPPL2P10696 532 aa18.02■□□□□ 0.48
PRKCSH-209ENST00000589838 ZNF10P21506 573 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-209ENST00000589838 YPEL5P62699 121 aa18.02■□□□□ 0.48
PRKCSH-209ENST00000589838 DUSP2Q05923 314 aa18.02■□□□□ 0.48
PRKCSH-209ENST00000589838 HTR4Q13639 388 aa18.02■□□□□ 0.48
PRKCSH-209ENST00000589838 ZNF404Q494X3 552 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms