RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 PPP2CBP62714 309 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 PPP2CAP67775 309 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 HBA1P69905 142 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 RPP38P78345 283 aaKnown RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 HPCAP84074 193 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 VLDLRP98155 873 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 EEF1A2Q05639 463 aaKnown RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 TGM3Q08188 693 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 NPRL3Q12980 569 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 SLC14A1Q13336 389 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 MAD2L1BPQ15013 274 aaPredicted RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 MEP1AQ16819 746 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 MICAQ29983 383 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 UAP1L1Q3KQV9 507 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 IQCCQ4KMZ1 466 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 LYSMD4Q5XG99 296 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 SAXO2Q658L1 398 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 ANKRD26P1Q6NSI1 321 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 BHLHB9Q6PI77 547 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 CRTC3Q6UUV7 619 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 FAM83HQ6ZRV2 1179 aaPredicted RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 CHST15Q7LFX5 561 aaPredicted RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 PRSS48Q7RTY5 328 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 CYP4Z1Q86W10 505 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 NUDT13Q86X67 352 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 RBM12BQ8IXT5 1001 aaKnown RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 PARP8Q8N3A8 854 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 RNF175Q8N4F7 328 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 LINC00471Q8N535 108 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 AVL9Q8NBF6 648 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 TMEM145Q8NBT3 493 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 SRFBP1Q8NEF9 429 aaKnown RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 BPIFB6Q8NFQ5 453 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 OR5AR1Q8NGP9 310 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 OR2I1PQ8NGU4 316 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 OR2L8Q8NGY9 312 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 PSMA8Q8TAA3 256 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 WDR48Q8TAF3 677 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 BAHD1Q8TBE0 780 aaPredicted RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 SPPL2AQ8TCT8 520 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 DNASE2BQ8WZ79 361 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 NR4A3Q92570 626 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 PIGKQ92643 395 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 RORBQ92753 470 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 MYDGFQ969H8 173 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 MOAP1Q96BY2 351 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 ZBED6CLQ96FA7 236 aaPredicted RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 PDXPQ96GD0 296 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 LOXL4Q96JB6 756 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 DHRS1Q96LJ7 313 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 ZNF300Q96RE9 604 aaPredicted RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 ZNF607Q96SK3 696 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 PIP5K1AQ99755 562 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 MAPKAP1Q9BPZ7 522 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 ORAI3Q9BRQ5 295 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 SPATA5L1Q9BVQ7 753 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 FAIM2Q9BWQ8 316 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 MS4A8Q9BY19 250 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.43□□□□□ -1.54
SDF2-206ENST00000587788 OR51B5Q9H339 312 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 RIBC2Q9H4K1 309 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 DDX31Q9H8H2 851 aaKnown RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 TBC1D23Q9NUY8 699 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 EXD2Q9NVH0 621 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 NDUFAF4Q9P032 175 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 WARS2Q9UGM6 360 aaKnown RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 SUSD2Q9UGT4 822 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 PILRBQ9UKJ0 227 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 UTS2RQ9UKP6 389 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 CDC14AQ9UNH5 594 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 ERVK-11Q9UQG0 969 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 B3GNT3Q9Y2A9 372 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 TDRKHQ9Y2W6 561 aaKnown RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.43□□□□□ -1.54
SDF2-206ENST00000587788 PCDHGA5Q9Y5G8 931 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 ENPP4Q9Y6X5 453 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 U3KQV3 271 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 PTPRBP23467 1997 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 CACNA1EQ15878 2313 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 ZNF292O60281 2723 aa5.43□□□□□ -1.54
SDF2-206ENST00000587788 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.42□□□□□ -1.54
SDF2-206ENST00000587788 PRSS38A1L453 326 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 SH3PXD2BA1X283 911 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 SH3D21A4FU49 640 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 KRT87PA6NCN2 255 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 FAM181BA6NEQ2 426 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 PTGES3LE9PB15 166 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 TLR4O00206 839 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 PLPP1O14494 284 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 NDUFS4O43181 175 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 SH3BP5O60239 455 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 FAM20BO75063 409 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 LRP3O75074 770 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 SERPINB7O75635 380 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 CLPXO76031 633 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 OXSR1O95747 527 aaPredicted RBP5.42□□□□□ -1.54
SDF2-206ENST00000587788 FUCA1P04066 466 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 IFNW1P05000 195 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 IL3P08700 152 aa5.42□□□□□ -1.54
SDF2-206ENST00000587788 ETFAP13804 333 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms