RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 BMP7P18075 431 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 KRT15P19012 456 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 KLK2P20151 261 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 DNASE1P24855 282 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 PTPN6P29350 595 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 CCNG1P51959 295 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 PPP2R2AP63151 447 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 TRAF3Q13114 568 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 NNATQ16517 81 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 WIPI1Q5MNZ9 446 aaPredicted RBP17.68■□□□□ 0.42
TRAF4-216ENST00000586813 C10orf62Q5T681 223 aaPredicted RBP17.68■□□□□ 0.42
TRAF4-216ENST00000586813 TIGD3Q6B0B8 471 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 TTC19Q6DKK2 380 aaPredicted RBP17.68■□□□□ 0.42
TRAF4-216ENST00000586813 PLD6Q8N2A8 252 aaKnown RBP17.68■□□□□ 0.42
TRAF4-216ENST00000586813 VWA5B2Q8N398 1253 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 ATP6V1E2Q96A05 226 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 WDYHV1Q96HA8 205 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 TRIB1Q96RU8 372 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 NTMT1Q9BV86 223 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 NXF5Q9H1B4 397 aaKnown RBP17.68■□□□□ 0.42
TRAF4-216ENST00000586813 VPS11Q9H270 941 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 METTL7AQ9H8H3 244 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 PCTPQ9UKL6 214 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 EDARQ9UNE0 448 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 ABCA4P78363 2273 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 ESYT3A0FGR9 886 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 MBD3L4A6NDZ8 208 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-216ENST00000586813 MBD3L3A6NE82 208 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-216ENST00000586813 MBD3L5A6NJ08 208 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-216ENST00000586813 GNB5O14775 395 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 CDH16O75309 829 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 PPM1BO75688 479 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 ABCB1P08183 1280 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-216ENST00000586813 PORP16435 677 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-216ENST00000586813 S1PR1P21453 382 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 MAPK12P53778 367 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 DAZAP2Q15038 168 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-216ENST00000586813 CCNYL2Q5T2Q4 361 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 ANGPTL8Q6UXH0 198 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 PAGE2Q7Z2X7 111 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 MBD3L2Q8NHZ7 208 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-216ENST00000586813 PHF21BQ96EK2 531 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 NSUN5Q96P11 429 aaKnown RBP17.67■□□□□ 0.42
TRAF4-216ENST00000586813 ALPK1Q96QP1 1244 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 ZBTB26Q9HCK0 441 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 AHSPQ9NZD4 102 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 MED12Q93074 2177 aa17.67■□□□□ 0.42
TRAF4-216ENST00000586813 TUBAL3A6NHL2 446 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 STX16-NPEPL1H3BU86 382 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 STX16O14662 325 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 NAGAP17050 411 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 CASQ1P31415 396 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 PHBP35232 272 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 NAGLUP54802 743 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 IFT88Q13099 833 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 PRICKLE4Q2TBC4 344 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 GGTA1PQ4G0N0 100 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 UBAP2Q5T6F2 1119 aaKnown RBP17.66■□□□□ 0.42
TRAF4-216ENST00000586813 SLC48A1Q6P1K1 146 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 TMEM81Q6P7N7 255 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 PAMR1Q6UXH9 720 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 COMMD6Q7Z4G1 85 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 KIF18BQ86Y91 864 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 METTL4Q8N3J2 472 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 FAM83FQ8NEG4 500 aaPredicted RBP17.66■□□□□ 0.42
TRAF4-216ENST00000586813 OR1J4Q8NGS1 313 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 ABTB1Q969K4 478 aaPredicted RBP17.66■□□□□ 0.42
TRAF4-216ENST00000586813 ITPAQ9BY32 194 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 BRINP2Q9C0B6 783 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 EPB41L4BQ9H329 900 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 ACSS3Q9H6R3 686 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 ZDHHC18Q9NUE0 388 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 MAT2BQ9NZL9 334 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 XPR1Q9UBH6 696 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 FETUBQ9UGM5 382 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 CES1P1Q9UKY3 287 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 TMCO1Q9UM00 188 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 CFL2Q9Y281 166 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 PCDHA9Q9Y5H5 950 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 ACANP16112 2415 aa17.66■□□□□ 0.42
TRAF4-216ENST00000586813 FLNAP21333 2647 aaKnown RBP17.65■□□□□ 0.42
TRAF4-216ENST00000586813 C1orf226A1L170 272 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 GOLGA6L10A6NI86 522 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 EEF1E1-BLOC1S5C9J1V9 151 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 EEF1E1O43324 174 aaKnown RBP17.65■□□□□ 0.42
TRAF4-216ENST00000586813 ATP1B1P05026 303 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 RBP1P09455 135 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 CTSSP25774 331 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 MAGEA12P43365 314 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 AGFG1P52594 562 aaKnown RBP17.65■□□□□ 0.42
TRAF4-216ENST00000586813 DGKQP52824 942 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 SORDQ00796 357 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 SLC7A5Q01650 507 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 MGAT2Q10469 447 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 MAP4K2Q12851 820 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 FOXD4Q12950 439 aaPredicted RBP17.65■□□□□ 0.42
TRAF4-216ENST00000586813 RCAN2Q14206 197 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 EXOSC7Q15024 291 aaKnown RBP17.65■□□□□ 0.42
TRAF4-216ENST00000586813 SGO1Q5FBB7 561 aa17.65■□□□□ 0.42
TRAF4-216ENST00000586813 DESI1Q6ICB0 168 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms