RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 COX7A2P14406 83 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 CD46P15529 392 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 PRPH2P23942 346 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 MST1P26927 711 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 EPHA3P29320 983 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 HMOX2P30519 316 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 SOX18P35713 384 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 ST13P50502 369 aaKnown RBP8□□□□□ -1.13
ATG4D-202ENST00000585437 ATP4BP51164 291 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 MAPK12P53778 367 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 SLC37A1P57057 533 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 STX1BP61266 288 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 KLF10Q13118 480 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 SQLEQ14534 574 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 MPEG1Q2M385 716 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 EIF2S3LQ2VIR3 472 aaKnown RBP8□□□□□ -1.13
ATG4D-202ENST00000585437 LSM12Q3MHD2 195 aaKnown RBP8□□□□□ -1.13
ATG4D-202ENST00000585437 SPIN4Q56A73 249 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 SGO1Q5FBB7 561 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 CCNYL2Q5T2Q4 361 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 NXNQ6DKJ4 435 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 SPINK14Q6IE38 97 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 SLC25A25Q6KCM7 469 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 C16orf89Q6UX73 402 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 HSDL2Q6YN16 418 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 TRIM46Q7Z4K8 759 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 GALNTL5Q7Z4T8 443 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 NET1Q7Z628 596 aaPredicted RBP8□□□□□ -1.13
ATG4D-202ENST00000585437 SIAH3Q8IW03 269 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 GPALPP1Q8IXQ4 340 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 CLYBLQ8N0X4 340 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 CYP4Z2PQ8N1L4 340 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 METTL6Q8TCB7 284 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 THAP3Q8WTV1 239 aaPredicted RBP8□□□□□ -1.13
ATG4D-202ENST00000585437 JADE3Q92613 823 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 TM4SF18Q96CE8 201 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 C5orf34Q96MH7 638 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 OR52B2Q96RD2 323 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 RASL10BQ96S79 203 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 CCT7Q99832 543 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 OR8D2Q9GZM6 311 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 CXorf21Q9HAI6 301 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 MID1IP1Q9NPA3 183 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 NMRK1Q9NWW6 199 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 MAP10Q9P2G4 905 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 COPS7AQ9UBW8 275 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 MCM8Q9UJA3 840 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 PRPF19Q9UMS4 504 aaKnown RBP8□□□□□ -1.13
ATG4D-202ENST00000585437 CCL27Q9Y4X3 112 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 TIMM22Q9Y584 194 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 PCDHA9Q9Y5H5 950 aa8□□□□□ -1.13
ATG4D-202ENST00000585437 ARHGAP21Q5T5U3 1957 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 ARHGAP10A1A4S6 786 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 OR6C76A6NM76 312 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 SDHDO14521 159 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 GUCY1B2O75343 617 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 CRCPO75575 148 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 NADKO95544 446 aaPredicted RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 ATP1B1P05026 303 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 STSP08842 583 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 CT62P0C5K7 136 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 RNF224P0DH78 156 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 CPMP14384 443 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 PIK3R1P27986 724 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 TIA1P31483 386 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 SOX3P41225 446 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 GSTM5P46439 218 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 CPA2P48052 419 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 SSR4P51571 173 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 ERVK-8P63133 956 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 HMGCS1Q01581 520 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 OC90Q02509 493 aaPredicted RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 BTKQ06187 659 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 FUT7Q11130 342 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 CYLC2Q14093 348 aaPredicted RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 EBPQ15125 230 aaKnown RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 CEBPEQ15744 281 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 FHL5Q5TD97 284 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 LYPD8Q6UX82 237 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 C16orf47Q6ZP98 133 aaPredicted RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 MDGA2Q7Z553 956 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 ULK2Q8IYT8 1036 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 MMP21Q8N119 569 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 ZNF441Q8N8Z8 693 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 GOLM1Q8NBJ4 401 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 PHF3Q92576 2039 aaKnown RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 PPWD1Q96BP3 646 aaKnown RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 CNRIP1Q96F85 164 aaPredicted RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 APIPQ96GX9 242 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 RBM18Q96H35 190 aaKnown RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 SENP5Q96HI0 755 aaPredicted RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 METTL2AQ96IZ6 378 aaKnown RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 ZNF681Q96N22 645 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 PSMG3-AS1Q96PY0 264 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 SHCBP1LQ9BZQ2 653 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 DENND2DQ9H6A0 471 aaPredicted RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 ZNF385DQ9H6B1 395 aa7.99□□□□□ -1.13
ATG4D-202ENST00000585437 WDR55Q9H6Y2 383 aaPredicted RBP7.99□□□□□ -1.13
ATG4D-202ENST00000585437 PRM3Q9NNZ6 103 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms