RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 LINC00032P0C843 101 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 CCL3P10147 92 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 HSD3B1P14060 373 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 CPN2P22792 545 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 HSD3B2P26439 372 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 TBL3Q12788 808 aaKnown RBP14.45□□□□□ -0.1
SKA2-209ENST00000583976 HSDL2Q6YN16 418 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 COMMD6Q7Z4G1 85 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 NUDT13Q86X67 352 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 DDIASQ8IXT1 998 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 DMRTC2Q8IXT2 367 aaPredicted RBP14.45□□□□□ -0.1
SKA2-209ENST00000583976 C1orf52Q8N6N3 182 aaKnown RBP14.45□□□□□ -0.1
SKA2-209ENST00000583976 ZNF781Q8N8C0 355 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 GBP7Q8N8V2 638 aaPredicted RBP14.45□□□□□ -0.1
SKA2-209ENST00000583976 LILRB4Q8NHJ6 448 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 SLC2A12Q8TD20 617 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 APIPQ96GX9 242 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 DDX31Q9H8H2 851 aaKnown RBP14.45□□□□□ -0.1
SKA2-209ENST00000583976 MANSC1Q9H8J5 431 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 MRPS33Q9Y291 106 aaKnown RBP14.45□□□□□ -0.1
SKA2-209ENST00000583976 CLCA3PQ9Y6N3 262 aa14.45□□□□□ -0.1
SKA2-209ENST00000583976 AKAP6Q13023 2319 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 A0A0A6YYD5 115 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 C17orf105B2RV13 164 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 CLDN4O14493 209 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 SKAP2O75563 359 aaPredicted RBP14.44□□□□□ -0.1
SKA2-209ENST00000583976 SCELO95171 688 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 FAM58BPP0C7Q3 252 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 ENDOUP21128 410 aaKnown RBP14.44□□□□□ -0.1
SKA2-209ENST00000583976 ARFIP1P53367 373 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 HNRNPH2P55795 449 aaKnown RBP14.44□□□□□ -0.1
SKA2-209ENST00000583976 UGT3A2Q3SY77 523 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 CCNYL2Q5T2Q4 361 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 RTL6Q6ICC9 239 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 TMEM211Q6ICI0 200 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 ZNF585AQ6P3V2 769 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 PAGE2Q7Z2X7 111 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 TRIM42Q8IWZ5 723 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 GPALPP1Q8IXQ4 340 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 TMEM132CQ8N3T6 1108 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 ZCCHC7Q8N3Z6 543 aaKnown RBP14.44□□□□□ -0.1
SKA2-209ENST00000583976 OR14A16Q8NHC5 309 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 DOK4Q8TEW6 326 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 TWIST2Q8WVJ9 160 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 DYDC1Q8WWB3 177 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 SORT1Q99523 831 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 TUBB1Q9H4B7 451 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 LYRM4Q9HD34 91 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 KCNJ16Q9NPI9 418 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 TUBA8Q9NY65 449 aaPredicted RBP14.44□□□□□ -0.1
SKA2-209ENST00000583976 ATG4BQ9Y4P1 393 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 SPACA6W5XKT8 324 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 ITPR3Q14573 2671 aa14.44□□□□□ -0.1
SKA2-209ENST00000583976 SERTM1A2A2V5 107 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 HRKO00198 91 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 SLC28A1O00337 649 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 PIP5K1BO14986 540 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 PRKRAO75569 313 aaKnown RBP14.43□□□□□ -0.1
SKA2-209ENST00000583976 ACVR2AP27037 513 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 ADH7P40394 386 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 ART1P52961 327 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 RNF4P78317 190 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 ACSM2AQ08AH3 577 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 FOXO1Q12778 655 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 MYBPHQ13203 477 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 SNTB1Q13884 538 aaKnown RBP14.43□□□□□ -0.1
SKA2-209ENST00000583976 GXYLT1Q4G148 440 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 HSP90B2PQ58FF3 399 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 ATG16L1Q676U5 607 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 ACSM2BQ68CK6 577 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 C18orf63Q68DL7 685 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 MRM1Q6IN84 353 aaKnown RBP14.43□□□□□ -0.1
SKA2-209ENST00000583976 DGAT2L6Q6ZPD8 337 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 RTL4Q6ZR62 310 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 GK5Q6ZS86 529 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 TRILQ7L0X0 811 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 TRIM46Q7Z4K8 759 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 GPR180Q86V85 440 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 SLC22A16Q86VW1 577 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 FAM109AQ8N4B1 249 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 OR2T11Q8NH01 316 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 ZNF75CPQ92670 426 aaPredicted RBP14.43□□□□□ -0.1
SKA2-209ENST00000583976 UCN3Q969E3 161 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 PPP1R36Q96LQ0 422 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 ZNF559Q9BR84 538 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 EBPLQ9BY08 206 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 ALOXE3Q9BYJ1 711 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 INTS9Q9NV88 658 aaKnown RBP14.43□□□□□ -0.1
SKA2-209ENST00000583976 PNPOQ9NVS9 261 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 SPRR3Q9UBC9 169 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 RAP2CQ9Y3L5 183 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 ASB4Q9Y574 426 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 DNHD1Q96M86 4753 aa14.43□□□□□ -0.1
SKA2-209ENST00000583976 ANKHD1Q8IWZ3 2542 aaKnown RBP14.42□□□□□ -0.1
SKA2-209ENST00000583976 A0A0G2JNJ9 132 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 ATP6AP2A0A1C7CYW4 349 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 GLOD5A6NK44 160 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 FIGNL2A6NMB9 653 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 WASHC1A8K0Z3 465 aa14.42□□□□□ -0.1
SKA2-209ENST00000583976 ATP8B1O43520 1251 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms