RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 RAB1BQ9H0U4 201 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 PLEK2Q9NYT0 353 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 HOOK1Q9UJC3 728 aaKnown RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 NUP50Q9UKX7 468 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 PRR14LQ5THK1 2151 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 CCL22O00626 93 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 NRDCO43847 1150 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 LCMT2O60294 686 aaKnown RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 IGKV3-11P04433 115 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 ANPEPP15144 967 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 COILP38432 576 aaPredicted RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 SERPINB4P48594 390 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 IDH3GP51553 393 aaPredicted RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 NDUFA8P51970 172 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 FBXW4P57775 412 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 DCTN2Q13561 401 aaKnown RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 RABEP1Q15276 862 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 KLHL17Q6TDP4 642 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 P2RY8Q86VZ1 359 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 TAGAPQ8N103 731 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 GPATCH11Q8N954 259 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 WDR60Q8WVS4 1066 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 VRK1Q99986 396 aaPredicted RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 NPLQ9BXD5 320 aaPredicted RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 SERHLQ9NQF3 203 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 NLE1Q9NVX2 485 aaPredicted RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 ZNF69Q9UC07 566 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 AMFRQ9UKV5 643 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 ATP23Q9Y6H3 246 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 AQP8O94778 261 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 ETHE1O95571 254 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 CRYBA1P05813 215 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 UCHL3P15374 230 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 CD40P25942 277 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 HNRNPFP52597 415 aaKnown RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 RAB38P57729 211 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 IRX6P78412 446 aaPredicted RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 PNOCQ13519 176 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 TSTA3Q13630 321 aaPredicted RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 RPS6KA1Q15418 735 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 DEPDC1Q5TB30 811 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 PPP1R2P3Q6NXS1 205 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 TMEM52Q8NDY8 209 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 POP5Q969H6 163 aaKnown RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 MUCL1Q96DR8 90 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 MYNNQ9NPC7 610 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 GPRC5BQ9NZH0 403 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 RCOR1Q9UKL0 485 aa5.27□□□□□ -1.57
CCDC178-209ENST00000579947 EXO1Q9UQ84 846 aaKnown RBP5.27□□□□□ -1.57
CCDC178-209ENST00000579947 NDUFS4O43181 175 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 ALOX5P09917 674 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 SAGP10523 405 aaPredicted RBP5.26□□□□□ -1.57
CCDC178-209ENST00000579947 PSMA3P25788 255 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 LMO4P61968 165 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 RGS1Q08116 209 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 NRN1LQ496H8 165 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 TIMM23BQ5SRD1 257 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 ARFGEF3Q5TH69 2177 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 ATL3Q6DD88 541 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 STRA8Q7Z7C7 330 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 OR4N5Q8IXE1 308 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 C7orf57Q8NEG2 295 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 GSDMBQ8TAX9 411 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 UBASH3BQ8TF42 649 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 PYCR2Q96C36 320 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 FBXO17Q96EF6 278 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 FAR2Q96K12 515 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 DNAJC1Q96KC8 554 aaKnown RBP5.26□□□□□ -1.57
CCDC178-209ENST00000579947 DGAT2Q96PD7 388 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 SLC30A2Q9BRI3 323 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 ALOXE3Q9BYJ1 711 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 MRPS33Q9Y291 106 aaKnown RBP5.26□□□□□ -1.57
CCDC178-209ENST00000579947 WI2-2373I1.2A0A1W2PRP0 233 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 FAM181BA6NEQ2 426 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 RGS14O43566 566 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 CTNSO60931 367 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 PLGP00747 810 aaPredicted RBP5.26□□□□□ -1.57
CCDC178-209ENST00000579947 ZSCAN22P10073 491 aaPredicted RBP5.26□□□□□ -1.57
CCDC178-209ENST00000579947 TNNI3P19429 210 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 ATP5DP30049 168 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 PTGDSP41222 190 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 NEK2P51955 445 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 SUCLG1P53597 346 aaKnown RBP5.26□□□□□ -1.57
CCDC178-209ENST00000579947 RPS3AP61247 264 aaKnown RBP5.26□□□□□ -1.57
CCDC178-209ENST00000579947 RPL15P61313 204 aaKnown RBP5.26□□□□□ -1.57
CCDC178-209ENST00000579947 MYBPC1Q00872 1141 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 ITGADQ13349 1161 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 CUL4AQ13619 759 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 SETDB1Q15047 1291 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 DPCR1Q3MIW9 517 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 FAM205BPQ63HN1 556 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 TFAP2EQ6VUC0 442 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 BCL6BQ8N143 479 aaPredicted RBP5.26□□□□□ -1.57
CCDC178-209ENST00000579947 CCDC34Q96HJ3 373 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 OLFM3Q96PB7 478 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 WWTR1Q9GZV5 400 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 CTNND2Q9UQB3 1225 aa5.26□□□□□ -1.57
CCDC178-209ENST00000579947 TSC22D4Q9Y3Q8 395 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms