RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAM83F	Q8NEG4	500 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	WFDC11	Q8NEX6	87 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ADCY4	Q8NFM4	1077 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR4F6	Q8NGB9	312 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	LINC01560	Q8TB33	94 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NUDT8	Q8WV74	236 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CHTF18	Q8WVB6	975 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RIT1	Q92963	219 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TP53INP1	Q96A56	240 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PHF21B	Q96EK2	531 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TSPAN17	Q96FV3	270 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	VSTM2L	Q96N03	204 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RILP	Q96NA2	401 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RUNDC3B	Q96NL0	473 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	DGAT2	Q96PD7	388 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GAL3ST4	Q96RP7	486 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KCNA7	Q96RP8	456 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FOXC2	Q99958	501 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TUBA1C	Q9BQE3	449 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CAPS2	Q9BXY5	557 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ACPT	Q9BZG2	426 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR10A5	Q9H207	317 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	C12orf65	Q9H3J6	166 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CNOT10	Q9H9A5	744 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NMRAL1	Q9HBL8	299 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KCNJ16	Q9NPI9	418 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	QPCTL	Q9NXS2	382 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NSMCE4A	Q9NXX6	385 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EHD3	Q9NZN3	535 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TMEM216	Q9P0N5	145 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	XPR1	Q9UBH6	696 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FETUB	Q9UGM5	382 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ST6GALNAC2	Q9UJ37	374 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FBXL2	Q9UKC9	423 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PLEKHA6	Q9Y2H5	1048 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PLLP	Q9Y342	182 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CCL27	Q9Y4X3	112 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PCDHGB3	Q9Y5G1	929 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PCDHA9	Q9Y5H5	950 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NPFFR2	Q9Y5X5	522 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HEATR5A	Q86XA9	2040 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ARID1A	O14497	2285 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	COL6A5	A8TX70	2615 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ATR	Q13535	2644 aa		4.05	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FREM1	Q5H8C1	2179 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SON	P18583	2426 aa	Known RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329		A0A087X1B8	175 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CCDC189	A1A4V9	331 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CD8B2	A6NJW9	211 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329		A6NNC1	897 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	DEFB108A	A8MXU0	73 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NPIPB8	E9PQR5	432 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329		G3V2L1	256 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	STX16-NPEPL1	H3BU86	382 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MANBA	O00462	879 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	STX16	O14662	325 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GNB5	O14775	395 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SNPH	O15079	494 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	T	O15178	435 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HCRTR2	O43614	444 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	UGDH	O60701	494 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ICOSLG	O75144	302 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PPM1B	O75688	479 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR4F21	O95013	312 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MLYCD	O95822	493 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CGA	P01215	116 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	IGKV1D-16	P01601	117 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HRG	P04196	525 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329		P04436	131 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAM153B	P0C7A2	387 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CD53	P19397	219 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TNNI3	P19429	210 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KLK2	P20151	261 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	BMP5	P22003	454 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TACR1	P25103	407 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PTX3	P26022	381 aa	Predicted RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SERPINB1	P30740	379 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HOXC12	P31275	282 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ARRB2	P32121	409 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TIMP3	P35625	211 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HSD17B3	P37058	310 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FEN1	P39748	380 aa	Known RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MAP3K8	P41279	467 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	LHX2	P50458	406 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	XK	P51811	444 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SUCLG1	P53597	346 aa	Known RBP	4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KCNJ2	P63252	427 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PSG6	Q00889	435 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PLIN5	Q00G26	463 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HMGCS1	Q01581	520 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KRTAP1-1	Q07627	177 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NAB1	Q13506	487 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RPS6KA2	Q15349	733 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TMEM44	Q2T9K0	475 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLC25A35	Q3KQZ1	300 aa		4.04	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAM153C	Q494X1	144 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms