RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ST8SIA2Q92186 375 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 WBP1Q96G27 269 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 POLDIP3Q9BY77 421 aaKnown RBP13.64□□□□□ -0.23
SMG6-215ENST00000574501 DLL4Q9NR61 685 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 SDHAF2Q9NX18 166 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 TNFRSF10DQ9UBN6 386 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 ATP6V1HQ9UI12 483 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 SLC9A8Q9Y2E8 581 aa13.64□□□□□ -0.23
SMG6-215ENST00000574501 hCG_1807616A0A1W2PRN6 198 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 TMEM129A0AVI4 362 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 TEX46H3BTG2 121 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 M0R233 179 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 GPR171O14626 319 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 SLC19A2O60779 497 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 TCRBP04435 133 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 BCHEP06276 602 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 EIF4EP06730 217 aaKnown RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 ZP3P21754 424 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 AHCYP23526 432 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 GIFP27352 417 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 DGKGP49619 791 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 CCR6P51684 374 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 RPS13P62277 151 aaKnown RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 PIN1Q13526 163 aaPredicted RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 MRPL58Q14197 206 aaKnown RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 ST3GAL2Q16842 350 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 PRSS53Q2L4Q9 553 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 CDKL4Q5MAI5 379 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 LYPD4Q6UWN0 246 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 GPR142Q7Z601 462 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 ZNF280BQ86YH2 543 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 DBF4BQ8NFT6 615 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 OR8D4Q8NGM9 314 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 RAET1EQ8TD07 263 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 FOXJ1Q92949 421 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 HCN3Q9P1Z3 774 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 TRPV2Q9Y5S1 764 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 TDRD15B5MCY1 1934 aaKnown RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 A0A1B0GVM2 712 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 LGALS8O00214 317 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 FAAHO00519 579 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 SSNA1O43805 119 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 NME6O75414 186 aaPredicted RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 GJB5O95377 273 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 C8GP07360 202 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 ACP2P11117 423 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 TIA1P31483 386 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMG6-215ENST00000574501 NUP62P37198 522 aaPredicted RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 GIPRP48546 466 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 ZNF273Q14593 569 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 SPIN4Q56A73 249 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 TNFAIP8L2Q6P589 184 aaPredicted RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 RFLNAQ6ZTI6 216 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 FAM92BQ6ZTR7 304 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 MRPL10Q7Z7H8 261 aaKnown RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 THOC6Q86W42 341 aaKnown RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 FTMTQ8N4E7 242 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 OR2T35Q8NGX2 323 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 APOBEC4Q8WW27 367 aaKnown RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 MRPS31Q92665 395 aaKnown RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 GPA33Q99795 319 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 REG4Q9BYZ8 158 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 BHLHE41Q9C0J9 482 aaPredicted RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 DPAGT1Q9H3H5 408 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 REEP4Q9H6H4 257 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 GKN1Q9NS71 199 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 LYARQ9NX58 379 aaKnown RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 GULP1Q9UBP9 304 aa13.63□□□□□ -0.23
SMG6-215ENST00000574501 PRG3Q9Y2Y8 225 aaPredicted RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 HELZP42694 1942 aaKnown RBP13.63□□□□□ -0.23
SMG6-215ENST00000574501 TMEM88BA6NKF7 163 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 RGS11O94810 467 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 KLKB1P03952 638 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 EPHX1P07099 455 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 IRF1P10914 325 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 HSD3B1P14060 373 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 SPAM1P38567 509 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 MTNR1AP48039 350 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 SLC11A2P49281 568 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 DSTNP60981 165 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 DSG2Q14126 1118 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 GRM7Q14831 915 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 GPR68Q15743 365 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 CXorf57Q6NSI4 855 aaKnown RBP13.62□□□□□ -0.23
SMG6-215ENST00000574501 SERPINA13PQ6UXR4 307 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 MMP21Q8N119 569 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 GOT1L1Q8NHS2 421 aaPredicted RBP13.62□□□□□ -0.23
SMG6-215ENST00000574501 CXorf58Q96LI9 332 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 C12orf66Q96MD2 445 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 CTPS2Q9NRF8 586 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 FBXW2Q9UKT8 454 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 SPATA2Q9UM82 520 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 ZFR2Q9UPR6 939 aaKnown RBP13.62□□□□□ -0.23
SMG6-215ENST00000574501 ASB4Q9Y574 426 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 MTMR11A4FU01 709 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 NDUFA2O43678 99 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 MTX2O75431 263 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 MMP11P24347 488 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 CSNK1DP48730 415 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms