RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 ACP1P24666 158 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 ARHGDIBP52566 201 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 ZNF131P52739 623 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 NME5P56597 212 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 SHROOM1Q2M3G4 852 aaPredicted RBP3.33□□□□□ -1.88
CDC27-216ENST00000574304 QRICH1Q2TAL8 776 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 HKDC1Q2TB90 917 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 TMEM270Q6UE05 265 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 ADAMTSL5Q6ZMM2 481 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 RAPH1Q70E73 1250 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 PRSS48Q7RTY5 328 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 FBXO16Q8IX29 292 aaPredicted RBP3.33□□□□□ -1.88
CDC27-216ENST00000574304 LINC00167Q96N53 147 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 NRN1Q9NPD7 142 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 ADAM22Q9P0K1 906 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 PRO0461Q9UI25 63 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 FBXW2Q9UKT8 454 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 PLEKHA6Q9Y2H5 1048 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 RNF115Q9Y4L5 304 aa3.33□□□□□ -1.88
CDC27-216ENST00000574304 LRRD1A4D1F6 860 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 SLC28A1O00337 649 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 AKAP3O75969 853 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 SERPINF2P08697 491 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 FERP16591 822 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 FCARP24071 287 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 SAA4P35542 130 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 VCPP55072 806 aaKnown RBP3.32□□□□□ -1.88
CDC27-216ENST00000574304 CAPRIN1Q14444 709 aaKnown RBP3.32□□□□□ -1.88
CDC27-216ENST00000574304 CD226Q15762 336 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 SGCBQ16585 318 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 C2orf83Q53S99 150 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 Q6ZVH6 145 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 GPR137CQ8N3F9 429 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 TMCO5AQ8N6Q1 288 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 RNASE8Q8TDE3 154 aaKnown RBP3.32□□□□□ -1.88
CDC27-216ENST00000574304 BCL2L2Q92843 193 aaPredicted RBP3.32□□□□□ -1.88
CDC27-216ENST00000574304 SLCO4A1Q96BD0 722 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 RAB39BQ96DA2 213 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 VSIG2Q96IQ7 327 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 C9orf85Q96MD7 179 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 CPXM1Q96SM3 734 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 ESM1Q9NQ30 184 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 CENPMQ9NSP4 180 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 ERVK-18Q9QC07 812 aa3.32□□□□□ -1.88
CDC27-216ENST00000574304 MRPS2Q9Y399 296 aaKnown RBP3.32□□□□□ -1.88
CDC27-216ENST00000574304 IGKV6D-21A0A0A0MT36 114 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 C5orf51A6NDU8 294 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 FRG2CA6NGY1 282 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 CHEK1O14757 476 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 PDE5AO76074 875 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 KRT6AP02538 564 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 KRT6BP04259 564 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 WNT2P09544 360 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 ATP5DP30049 168 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 KRT6CP48668 564 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 ZNF33BQ06732 778 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 CD47Q08722 323 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 ASAH1Q13510 395 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 GPAT3Q53EU6 434 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 B3GLCTQ6Y288 498 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 APOBEC3FQ8IUX4 373 aaKnown RBP3.31□□□□□ -1.88
CDC27-216ENST00000574304 UNC5CLQ8IV45 518 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 LPCAT1Q8NF37 534 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 TFB1MQ8WVM0 346 aaKnown RBP3.31□□□□□ -1.88
CDC27-216ENST00000574304 MAGEB18Q96M61 343 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 GPR137Q96N19 417 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 SLC5A7Q9GZV3 580 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 ASB8Q9H765 288 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 NARFQ9UHQ1 456 aa3.31□□□□□ -1.88
CDC27-216ENST00000574304 EPOPA6NHQ4 379 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 EI24O14681 340 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 TYROBPO43914 113 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 MGMTP16455 207 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 MUTP22033 750 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 IDSP22304 550 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 PTPN4P29074 926 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 XCR1P46094 333 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 HAND2P61296 217 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 ZNF85Q03923 595 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 SMU1Q2TAY7 513 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 OR13F1Q8NGS4 319 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 LINC01006Q8NI28 216 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 ZNF564Q8TBZ8 553 aaPredicted RBP3.3□□□□□ -1.88
CDC27-216ENST00000574304 U2AF1L4Q8WU68 220 aaKnown RBP3.3□□□□□ -1.88
CDC27-216ENST00000574304 DESI2Q9BSY9 194 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 MRPL9Q9BYD2 267 aaKnown RBP3.3□□□□□ -1.88
CDC27-216ENST00000574304 PLSCR3Q9NRY6 295 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 ABCG2Q9UNQ0 655 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 NTNG1Q9Y2I2 539 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 KLF2Q9Y5W3 355 aaPredicted RBP3.3□□□□□ -1.88
CDC27-216ENST00000574304 SNX5Q9Y5X3 404 aa3.3□□□□□ -1.88
CDC27-216ENST00000574304 SYNJ2O15056 1496 aa3.29□□□□□ -1.88
CDC27-216ENST00000574304 NPIPA5A0A0B4J1W7 369 aa3.29□□□□□ -1.88
CDC27-216ENST00000574304 NPIPA5E9PKD4 350 aa3.29□□□□□ -1.88
CDC27-216ENST00000574304 G3V3Y1 287 aa3.29□□□□□ -1.88
CDC27-216ENST00000574304 EEF2KO00418 725 aaKnown RBP3.29□□□□□ -1.88
CDC27-216ENST00000574304 CT45A10P0DMU9 189 aa3.29□□□□□ -1.88
CDC27-216ENST00000574304 IGFBP5P24593 272 aa3.29□□□□□ -1.88
CDC27-216ENST00000574304 MAT2AP31153 395 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms