RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CYP4Z2PQ8N1L4 340 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZNF615Q8N8J6 731 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 FAM98AQ8NCA5 519 aaKnown RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 VPS37AQ8NEZ2 397 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 OR52R1Q8NGF1 315 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 C16orf52Q8NHV5 167 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 KAT2AQ92830 837 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 RASL10BQ96S79 203 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 SIKE1Q9BRV8 207 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 BHLHE41Q9C0J9 482 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 WDR55Q9H6Y2 383 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 TRIM45Q9H8W5 580 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 DDX18Q9NVP1 670 aaKnown RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 ANKRD10Q9NXR5 420 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZNF639Q9UID6 485 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 BSNQ9UPA5 3926 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 A0A1W2PRB8 838 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 TMEM200CA6NKL6 621 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 TCP11X1B4DZS4 312 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 PLOD2O00469 737 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 UBDO15205 165 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 SLC28A2O43868 658 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 MAN1A2O60476 641 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 SLC25A12O75746 678 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 SORBS2O94875 1100 aaKnown RBP11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 CLPSP04118 112 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 FRKP42685 505 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 HSPB3Q12988 150 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 EXOSC7Q15024 291 aaKnown RBP11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 MLC1Q15049 377 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZNHIT3Q15649 155 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 GSTA3Q16772 222 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 PGS1Q32NB8 556 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 SLC9B1Q4ZJI4 515 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 SPINK14Q6IE38 97 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 EPGNQ6UW88 154 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 RIMKLAQ8IXN7 391 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 KRTCAP2Q8N6L1 136 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 CATSPER1Q8NEC5 780 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 OR7A2PQ8NGA2 310 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 CIDECQ96AQ7 238 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 COQ8BQ96D53 544 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 HSPBAP1Q96EW2 488 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 SGCZQ96LD1 299 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZBTB18Q99592 522 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 DUSP26Q9BV47 211 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 LIN28AQ9H9Z2 209 aaKnown RBP11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 C3orf14Q9HBI5 128 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 NEUROD4Q9HD90 331 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 TIMMDC1Q9NPL8 285 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 TCF7L2Q9NQB0 619 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 C19orf53Q9UNZ5 99 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 CSAG2Q9Y5P2 127 aa11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 SMG1Q96Q15 3661 aaKnown RBP11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 NUP214P35658 2090 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC1-206ENST00000573989 TTC36A6NLP5 189 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZNF195O14628 629 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 ACOX3O15254 700 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 CBX7O95931 251 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 LAMP1P11279 417 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 GPX3P22352 226 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 PTGER1P34995 402 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 SOX3P41225 446 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 MC3RP41968 323 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 KIR3DL1P43629 444 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 PPICP45877 212 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 NR0B1P51843 470 aaKnown RBP11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 AQP5P55064 265 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 STX1BP61266 288 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 RPP38P78345 283 aaKnown RBP11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 IRX1P78414 480 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 PRR5P85299 388 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 MAPKAPK3Q16644 382 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZNF385BQ569K4 471 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 ANXA8L1Q5VT79 327 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 SLC25A25Q6KCM7 469 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 TMEM107Q6UX40 140 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 IL20RBQ6UXL0 311 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 RTL4Q6ZR62 310 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 CAMKMTQ7Z624 323 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 GLB1L3Q8NCI6 653 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 MDS2Q8NDY4 140 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 OR7G2Q8NG99 324 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 OR5P2Q8WZ92 322 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 ADIPOR1Q96A54 375 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 TESCQ96BS2 214 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 ELP4Q96EB1 424 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 LCORQ96JN0 433 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 SIGLEC12Q96PQ1 595 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 CCDC28BQ9BUN5 200 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 AGPAT4Q9NRZ5 378 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 AIG1Q9NVV5 245 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 MAP10Q9P2G4 905 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 PCDHGB4Q9UN71 923 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 KLF13Q9Y2Y9 288 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 KALRNO60229 2985 aa11.81□□□□□ -0.52
TRAPPC1-206ENST00000573989 E9PBE3 544 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 KLRC4-KLRK1H3BQV0 150 aa11.8□□□□□ -0.52
TRAPPC1-206ENST00000573989 TP53I11O14683 189 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms