RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 DPEP2Q9H4A9 486 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 FAM124BQ9H5Z6 455 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 C10orf88Q9H8K7 445 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 POLD4Q9HCU8 107 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 Q9N2K0 584 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 SLC40A1Q9NP59 571 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CD320Q9NPF0 282 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 SLC2A4RGQ9NR83 387 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 ECHDC1Q9NTX5 307 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 ZNF701Q9NV72 531 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CLEC2DQ9UHP7 191 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 SIX4Q9UIU6 781 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 UTS2RQ9UKP6 389 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 SH2B3Q9UQQ2 575 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 GSTK1Q9Y2Q3 226 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 TMED7Q9Y3B3 224 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 USP16Q9Y5T5 823 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 STON1Q9Y6Q2 735 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 CDHR2Q9BYE9 1310 aa4.64□□□□□ -1.67
TOPBP1-210ENST00000572787 TRAV18A0A075B6X5 111 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 A0A1B0GTW7 788 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 A0A1B0GW15 77 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 SMCO2A6NFE2 343 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 RNASEK-C17orf49H0YIS7 233 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 TULP2O00295 520 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 DLGAP1O14490 977 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 RAB29O14966 203 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 INSIG1O15503 277 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 CLDN7O95471 211 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 FADS2O95864 444 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 GPANK1O95872 356 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 ASS1P00966 412 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 CST4P01036 141 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 EPOP01588 193 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 RAF1P04049 648 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 GSTA2P09210 222 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 CT45A8P0DMV1 189 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 CT45A9P0DMV2 189 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 CD58P19256 250 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 GTF2E2P29084 291 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 CYLC1P35663 651 aaPredicted RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 MMP12P39900 470 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 GYG1P46976 350 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 NPBWR2P48146 333 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 ACLYP53396 1101 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 LIMK2P53671 638 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 PSMD4P55036 377 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 PLP1P60201 277 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 MAGOHP61326 146 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 PPIAP62937 165 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 MRPS25P82663 173 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 ZXDBP98169 803 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 OGDHQ02218 1023 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 CFHR3Q02985 330 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 GABPAQ06546 454 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 RAD51Q06609 339 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 SNTA1Q13424 505 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 PEX6Q13608 980 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 CDH18Q13634 790 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 CAPRIN1Q14444 709 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 SGCAQ16586 387 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 KNOP1Q1ED39 458 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 ANXA2RQ3ZCQ2 193 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 SFT2D3Q587I9 215 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 SYT14P1Q58G82 188 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 CT45A2Q5DJT8 189 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 XKR6Q5GH73 641 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 ARMCX4Q5H9R4 360 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 TREML2Q5T2D2 321 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 LCN10Q6JVE6 187 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 FUT10Q6P4F1 479 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 DEF8Q6ZN54 512 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 LRRC74BQ6ZQY2 392 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 PID1Q7Z2X4 250 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 ANKRD33Q7Z3H0 272 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 MAVSQ7Z434 540 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 ARHGAP22Q7Z5H3 698 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 PTOV1Q86YD1 416 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 TBC1D10CQ8IV04 446 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 MMAAQ8IVH4 418 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 ARHGAP18Q8N392 663 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 SPATA6LQ8N4H0 392 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 ARFGAP1Q8N6T3 406 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 BMPERQ8N8U9 685 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 SLC38A9Q8NBW4 561 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 NECAP1Q8NC96 275 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 CCDC112Q8NEF3 446 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 OR52N4Q8NGI2 321 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 OR4D5Q8NGN0 318 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 SORCS1Q8WY21 1168 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 DAZLQ92904 295 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 TP53INP1Q96A56 240 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 TMEM125Q96AQ2 219 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 FAM131CQ96AQ9 280 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 RAD51AP1Q96B01 352 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 C8orf44Q96CB5 159 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 C10orf35Q96D05 121 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 LGALS12Q96DT0 336 aa4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 DUS3LQ96G46 650 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-210ENST00000572787 CCDC17Q96LX7 622 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms