RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PFDN1O60925 122 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 NOS1APO75052 506 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 DCTN3O75935 186 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 STC2O76061 302 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 HAUS5O94927 633 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 MT-CYBP00156 380 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 JCHAINP01591 159 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 OCMP0CE72 109 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 GSTT2P0CG29 244 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 GSTT2BP0CG30 244 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 PNMTP11086 282 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TPH1P17752 444 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 GNAZP19086 355 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TPSB2P20231 275 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ITGAXP20702 1163 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 DDCP20711 480 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TACR2P21452 398 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 G0S2P27469 103 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 MSX1P28360 303 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 OXTRP30559 389 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 SERPINB1P30740 379 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 SDHAP31040 664 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 CSF2RBP32927 897 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 HTR7P34969 479 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 CHI3L1P36222 383 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 ACVRL1P37023 503 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 CDKN1AP38936 164 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 MAGEA3P43357 314 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 MAGEA6P43360 314 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ALDH3B2P48448 385 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 HTR6P50406 440 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 PGGT1BP53609 377 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ARSFP54793 590 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ELLP55199 621 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 WNT3AP56704 352 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 C21orf59P57076 290 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 RGS8P57771 180 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 ACTBP60709 375 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 MAXP61244 160 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ARF6P62330 175 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ACTA2P62736 377 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 RPS24P62847 133 aaKnown RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 RPL10AP62906 217 aaKnown RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 ACTG1P63261 375 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ACTG2P63267 376 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ACTC1P68032 377 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ACTA1P68133 377 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 RBPJQ06330 500 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 FCHO2Q0JRZ9 810 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 CDH17Q12864 832 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ELAVL2Q12926 359 aaKnown RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 MTAPQ13126 283 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TARDBPQ13148 414 aaKnown RBP eCLIP3.36□□□□□ -1.878e-9■■■■■ 30
SMG6-208ENST00000570874 FLOT2Q14254 428 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TPSAB1Q15661 275 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 GSTA3Q16772 222 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 UGT3A2Q3SY77 523 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 KLHL22Q53GT1 634 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.36□□□□□ -1.87
SMG6-208ENST00000570874 ARHGAP40Q5TG30 622 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 LIPNQ5VXI9 398 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 RAET1LQ5VY80 246 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 PLPP4Q5VZY2 271 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 SEL1L3Q68CR1 1132 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 RNF43Q68DV7 783 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 SLC8B1Q6J4K2 584 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 FBXL22Q6P050 247 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 LIPIQ6XZB0 460 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 GLDNQ6ZMI3 551 aaPredicted RBP3.36□□□□□ -1.87
SMG6-208ENST00000570874 RFPL4BQ6ZWI9 263 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ACAD11Q709F0 780 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 CENPUQ71F23 418 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 SLC35D2Q76EJ3 337 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 PID1Q7Z2X4 250 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 KCTD20Q7Z5Y7 419 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 SNX20Q7Z614 316 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 CHSY1Q86X52 802 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 FAM90A1Q86YD7 464 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 HIPK1Q86Z02 1210 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 LYSMD2Q8IV50 215 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 LINC00518Q8N0U6 118 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 LGI2Q8N0V4 545 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 C4orf33Q8N1A6 199 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 LRRC75A-AS1Q8N1F1 130 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 PGBD5Q8N414 524 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 TMEM199Q8N511 208 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 LRRC17Q8N6Y2 441 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 FAM86B1Q8N7N1 296 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 PNPLA1Q8N8W4 532 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 PPFIBP2Q8ND30 876 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 NUDT10Q8NFP7 164 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 OR4C5Q8NGB2 326 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 SPATA22Q8NHS9 363 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 KCNG3Q8TAE7 436 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 WFDC5Q8TCV5 224 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 MCOLN3Q8TDD5 553 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 MZB1Q8WU39 189 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 DCAKDQ8WVC6 231 aa3.36□□□□□ -1.87
SMG6-208ENST00000570874 ARNTL2Q8WYA1 636 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms