RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 ZNF683Q8IZ20 524 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 ACVR1CQ8NER5 493 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 TRPV3Q8NET8 790 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 OR5D13Q8NGL4 314 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 SAP25Q8TEE9 199 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 TSEN15Q8WW01 171 aaKnown RBP4.21□□□□□ -1.74
CHD9-220ENST00000569794 SEPT8Q92599 483 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 RND1Q92730 232 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 DAZLQ92904 295 aaKnown RBP4.21□□□□□ -1.74
CHD9-220ENST00000569794 EMG1Q92979 244 aaKnown RBP4.21□□□□□ -1.74
CHD9-220ENST00000569794 TSACCQ96A04 125 aaPredicted RBP4.21□□□□□ -1.74
CHD9-220ENST00000569794 RAB39BQ96DA2 213 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 PANX2Q96RD6 677 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 BTBD10Q9BSF8 475 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 FUNDC2Q9BWH2 189 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 MRPL37Q9BZE1 423 aaKnown RBP4.21□□□□□ -1.74
CHD9-220ENST00000569794 ACTL8Q9H568 366 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 Q9H8V8 135 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 RNF121Q9H920 327 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 ELOVL3Q9HB03 270 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 DDX28Q9NUL7 540 aaKnown RBP4.21□□□□□ -1.74
CHD9-220ENST00000569794 GCNT4Q9P109 453 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 P2RX2Q9UBL9 471 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 CDH9Q9ULB4 789 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 ERVK-19Q9WJR5 959 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 NCKAP1Q9Y2A7 1128 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 SLC9A8Q9Y2E8 581 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 MAP3K19Q56UN5 1328 aa4.21□□□□□ -1.74
CHD9-220ENST00000569794 ERCC6Q03468 1493 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 C17orf105B2RV13 164 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 BLOC1S5-TXNDC5H3BN57 136 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 GOLGA8TH3BQL2 631 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 ZNF197O14709 1029 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 PCDH7O60245 1069 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 CLN5O75503 358 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 ANP32DO95626 131 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 NDUFB10O96000 172 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 SERPINF2P08697 491 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 HIST1H2AGP0C0S8 130 aaPredicted RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 TPSB2P20231 275 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 TRIM23P36406 574 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 CLDN15P56746 228 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 SEC61GP60059 68 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 SEC61BP60468 96 aaKnown RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 RPP38P78345 283 aaKnown RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 CSTF1Q05048 431 aaKnown RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 PNRC1Q12796 327 aaPredicted RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 PPIL2Q13356 520 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 TMEM132DQ14C87 1099 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 TPSAB1Q15661 275 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 CAMK4Q16566 473 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 KRTAP13-3Q3SY46 172 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 HIKESHIQ53FT3 197 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 ZNF542PQ5EBM4 170 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 WLSQ5T9L3 541 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 AGBL2Q5U5Z8 902 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 TMEM225Q6GV28 225 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 Q6ZPB1 254 aaPredicted RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 STXBP4Q6ZWJ1 553 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 CENPUQ71F23 418 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 GPR141Q7Z602 305 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 LUZP2Q86TE4 346 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 MMD2Q8IY49 270 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 LGI2Q8N0V4 545 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 ZNF444Q8N0Y2 327 aaPredicted RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 GPR137CQ8N3F9 429 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 NOA1Q8NC60 698 aaKnown RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 KCNG3Q8TAE7 436 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 RAET1EQ8TD07 263 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 MAGEC3Q8TD91 643 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 PIBF1Q8WXW3 757 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 HIST1H2ACQ93077 130 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 ABTB1Q969K4 478 aaPredicted RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 TMEM45BQ96B21 275 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 MRPL53Q96EL3 112 aaKnown RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 TSNARE1Q96NA8 513 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 RPRD1AQ96P16 312 aaPredicted RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 DEFB118Q96PH6 123 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 KRT12Q99456 494 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 CMKLR1Q99788 373 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 CHRDL1Q9BU40 450 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 GANQ9H2C0 597 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 C10orf88Q9H8K7 445 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 ZFP14Q9HCL3 533 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 MRPL22Q9NWU5 206 aaKnown RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 PDP1Q9P0J1 537 aaPredicted RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 LCMT1Q9UIC8 334 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 TINAGQ9UJW2 476 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 PADI3Q9ULW8 664 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 FAF1Q9UNN5 650 aaPredicted RBP4.2□□□□□ -1.74
CHD9-220ENST00000569794 PIGLQ9Y2B2 252 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 C15orf41Q9Y2V0 281 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 RNF215Q9Y6U7 377 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 NOTCH2Q04721 2471 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 PCDH11YQ9BZA8 1340 aa4.2□□□□□ -1.74
CHD9-220ENST00000569794 NINLQ9Y2I6 1382 aa4.19□□□□□ -1.74
CHD9-220ENST00000569794 TRAV26-1A0A087WT03 109 aa4.19□□□□□ -1.74
CHD9-220ENST00000569794 MED19A0JLT2 244 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms