RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GLOD4Q9HC38 313 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMG1-217ENST00000569764 PADI1Q9ULC6 663 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 SHOC2Q9UQ13 582 aa6.31□□□□□ -1.4
SMG1-217ENST00000569764 DENRO43583 198 aaKnown RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 DLGAP3O95886 979 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 ONECUT2O95948 504 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 ERCC1P07992 297 aaPredicted RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 ITPKAP23677 461 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 AVPR1BP47901 424 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 ITGA1P56199 1179 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 TMEM115Q12893 351 aaPredicted RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 CNPY1Q3B7I2 92 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 TMEM35AQ53FP2 167 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 KLHL26Q53HC5 615 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 TCHHL1Q5QJ38 904 aaPredicted RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 CDC73Q6P1J9 531 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 C5orf46Q6UWT4 87 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 POLNQ7Z5Q5 900 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 PQLC3Q8N755 202 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 IL17RCQ8NAC3 791 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 OR52J3Q8NH60 311 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 SLC35B2Q8TB61 432 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 ACTL9Q8TC94 416 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 ACOT11Q8WXI4 607 aaPredicted RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 EME1Q96AY2 570 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 WBP1Q96G27 269 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 DUS3LQ96G46 650 aaKnown RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 MRGPRX1Q96LB2 322 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 DGAT2Q96PD7 388 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 GABRG3Q99928 467 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 CDC42EP4Q9H3Q1 356 aaKnown RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 PIGUQ9H490 435 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 ASCL3Q9NQ33 180 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 TMLHEQ9NVH6 421 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 ZNF451Q9Y4E5 1061 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 SHROOM3Q8TF72 1996 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 J3QKU1 62 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 LANCL1O43813 399 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 CST8O60676 142 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 DNAJA2O60884 412 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 ZNF821O75541 412 aaPredicted RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 ZFPL1O95159 310 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 NID1P14543 1247 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 EPHA8P29322 1005 aaPredicted RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 SERPINB5P36952 375 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 AGFG1P52594 562 aaKnown RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 RGS1Q08116 209 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 NPTX1Q15818 432 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 YIF1BQ5BJH7 314 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 TFDP3Q5H9I0 405 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 SYPL2Q5VXT5 272 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 BHLHA9Q7RTU4 235 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 CCDC103Q8IW40 242 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 CCDC185Q8N715 623 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 UXS1Q8NBZ7 420 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 C9orf43Q8TAL5 461 aaPredicted RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 NAT9Q9BTE0 207 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 GSX2Q9BZM3 304 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 GEMIN7Q9H840 131 aaKnown RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 ANKRA2Q9H9E1 313 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 CSNK1G1Q9HCP0 422 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 TMEM184CQ9NVA4 438 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 KCTD3Q9Y597 815 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 ENTPD2Q9Y5L3 495 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 IGHV1OR15-9A0A0B4J2B8 117 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 TRABD2BA6NFA1 517 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 MDM4O15151 490 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 CLEC3AO75596 197 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 TMEM63AO94886 807 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 AGFG2O95081 481 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 APOL3O95236 402 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 IFNA6P05013 189 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 PPP3CBP16298 524 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 SLC6A6P31641 620 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 FHITP49789 147 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 ZNF143P52747 638 aaPredicted RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 ATP6V0D1P61421 351 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 DPYSL3Q14195 570 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 NFATC4Q14934 902 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 ARTNQ5T4W7 220 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 N4BP2L1Q5TBK1 243 aaPredicted RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 RFWD3Q6PCD5 774 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 TECPR1Q7Z6L1 1165 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 IGDCC3Q8IVU1 814 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 NAGSQ8N159 534 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 OR56A4Q8NGH8 313 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 FNDC8Q8TC99 324 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 PPP4R1Q8TF05 950 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 LCN9Q8WX39 176 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 THAP4Q8WY91 577 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 HPS1Q92902 700 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 BSCL2Q96G97 398 aaPredicted RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 C9orf72Q96LT7 481 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 FCRL3Q96P31 734 aaPredicted RBP6.3□□□□□ -1.4
SMG1-217ENST00000569764 COPS8Q99627 209 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 OR2AG1Q9H205 316 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 PLAC1Q9HBJ0 212 aa6.3□□□□□ -1.4
SMG1-217ENST00000569764 DLL3Q9NYJ7 618 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms