RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 NME5P56597 212 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 GPR85P60893 370 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 EMX2Q04743 252 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 INAQ16352 499 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 MPEG1Q2M385 716 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 PGS1Q32NB8 556 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 PIGGQ5H8A4 983 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 CPTPQ5TA50 214 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 TMEM64Q6YI46 380 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 RTL4Q6ZR62 310 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 FAM47EQ6ZV65 393 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 ZNF551Q7Z340 670 aaPredicted RBP11.85□□□□□ -0.51
CDT1-203ENST00000569140 WDR75Q8IWA0 830 aaKnown RBP11.85□□□□□ -0.51
CDT1-203ENST00000569140 GPALPP1Q8IXQ4 340 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 KRTCAP2Q8N6L1 136 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 BCORP1Q8N888 145 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 ZNF615Q8N8J6 731 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 SIMC1Q8NDZ2 872 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 OR7G2Q8NG99 324 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 PIWIL2Q8TC59 973 aaKnown RBP11.85□□□□□ -0.51
CDT1-203ENST00000569140 ZNF675Q8TD23 568 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 ZBED6CLQ96FA7 236 aaPredicted RBP11.85□□□□□ -0.51
CDT1-203ENST00000569140 AMDHD1Q96NU7 426 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 PRPF18Q99633 342 aaKnown RBP11.85□□□□□ -0.51
CDT1-203ENST00000569140 DPY30Q9C005 99 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 WDR55Q9H6Y2 383 aaPredicted RBP11.85□□□□□ -0.51
CDT1-203ENST00000569140 ATAD3AQ9NVI7 634 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 DTX4Q9Y2E6 619 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 KLF13Q9Y2Y9 288 aaPredicted RBP11.85□□□□□ -0.51
CDT1-203ENST00000569140 SDHDO14521 159 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 CFLARO15519 480 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 NME2P1O60361 137 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 ZNF354AO60765 605 aaPredicted RBP11.84□□□□□ -0.51
CDT1-203ENST00000569140 COQ9O75208 318 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 NME6O75414 186 aaPredicted RBP11.84□□□□□ -0.51
CDT1-203ENST00000569140 CRYABP02511 175 aaKnown RBP11.84□□□□□ -0.51
CDT1-203ENST00000569140 PRPS1L1P21108 318 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 NME2P22392 152 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 RFC3P40938 356 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 PRKAG1P54619 331 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 MGAT2Q10469 447 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 DUSP8Q13202 625 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 ELOAQ14241 798 aaKnown RBP11.84□□□□□ -0.51
CDT1-203ENST00000569140 RPUSD3Q6P087 351 aaKnown RBP11.84□□□□□ -0.51
CDT1-203ENST00000569140 MDGA2Q7Z553 956 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.84□□□□□ -0.51
CDT1-203ENST00000569140 ARMC10Q8N2F6 343 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 PSD4Q8NDX1 1056 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 MIB2Q96AX9 1013 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 MTERF3Q96E29 417 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 SCMH1Q96GD3 660 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 MARK4Q96L34 752 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 SLCO1B3Q9NPD5 702 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 EQTNQ9NQ60 294 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 OLAHQ9NV23 265 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 TAS2R7Q9NYW3 318 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 ZNF639Q9UID6 485 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 NTNG1Q9Y2I2 539 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 SNX8Q9Y5X2 465 aa11.84□□□□□ -0.51
CDT1-203ENST00000569140 CROCCQ5TZA2 2017 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 A0A1W2PRB8 838 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 CAPN14A8MX76 684 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 KLRC4-KLRK1H3BQV0 150 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 CDK2AP1O14519 115 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 PEX1O43933 1283 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 NADKO95544 446 aaPredicted RBP11.83□□□□□ -0.52
CDT1-203ENST00000569140 P04436 131 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 ABCB1P08183 1280 aaPredicted RBP11.83□□□□□ -0.52
CDT1-203ENST00000569140 LAMP1P11279 417 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 S1PR1P21453 382 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 KRT20P35900 424 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 TMED10P49755 219 aaKnown RBP11.83□□□□□ -0.52
CDT1-203ENST00000569140 MEOX1P50221 254 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 DIO3P55073 304 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 FOXK1P85037 733 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 ALDH6A1Q02252 535 aaKnown RBP11.83□□□□□ -0.52
CDT1-203ENST00000569140 PLGLB1Q02325 96 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 PLCXD2Q0VAA5 305 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 PDE7AQ13946 482 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 RPS6KA2Q15349 733 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 CEBPEQ15744 281 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 SMU1Q2TAY7 513 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 SPDYE7PQ495Y7 208 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 ACAD11Q709F0 780 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 SULF2Q8IWU5 870 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 CPSF7Q8N684 471 aaKnown RBP11.83□□□□□ -0.52
CDT1-203ENST00000569140 SLC15A4Q8N697 577 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 NUDT8Q8WV74 236 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 TP53INP1Q96A56 240 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 CTHRC1Q96CG8 243 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 ERP27Q96DN0 273 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 SPACA9Q96E40 222 aaPredicted RBP11.83□□□□□ -0.52
CDT1-203ENST00000569140 LCORQ96JN0 433 aaPredicted RBP11.83□□□□□ -0.52
CDT1-203ENST00000569140 MAGEB18Q96M61 343 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 C7orf26Q96N11 449 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 TAAR6Q96RI8 345 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 NXF5Q9H1B4 397 aaKnown RBP11.83□□□□□ -0.52
CDT1-203ENST00000569140 TSPAN10Q9H1Z9 355 aaPredicted RBP11.83□□□□□ -0.52
CDT1-203ENST00000569140 FOLH1BQ9HBA9 442 aa11.83□□□□□ -0.52
CDT1-203ENST00000569140 SACM1LQ9NTJ5 587 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms