RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 SNX33Q8WV41 574 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 IL17FQ96PD4 163 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 SPATA5L1Q9BVQ7 753 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 IFT27Q9BW83 186 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 GSX2Q9BZM3 304 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 TEX10Q9NXF1 929 aaPredicted RBP10.35□□□□□ -0.75
PALB2-206ENST00000568219 FBXW2Q9UKT8 454 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 LOXHD1Q8IVV2 1947 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 IRGMA1A4Y4 181 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 PTPN6P29350 595 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 SHC1P29353 583 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 SOX9P48436 509 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 AP1S2P56377 157 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 FABP5Q01469 135 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 ACVR1Q04771 509 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 KIAA0040Q15053 153 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 GDF6Q6KF10 455 aaPredicted RBP10.34□□□□□ -0.75
PALB2-206ENST00000568219 PODNL1Q6PEZ8 512 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 BRAT1Q6PJG6 821 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 SYT9Q86SS6 491 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 LINC01465Q8N7H1 131 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 OR51L1Q8NGJ5 315 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 GIMAP1Q8WWP7 306 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 CREB3L1Q96BA8 519 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 ZSWIM3Q96MP5 696 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 DDOQ99489 341 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 SDHCQ99643 169 aaPredicted RBP10.34□□□□□ -0.75
PALB2-206ENST00000568219 GABARAPL3Q9BY60 117 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 GABARAPL1Q9H0R8 117 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 KLHL31Q9H511 634 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 GPN1Q9HCN4 374 aaPredicted RBP10.34□□□□□ -0.75
PALB2-206ENST00000568219 EXO1Q9UQ84 846 aaKnown RBP10.34□□□□□ -0.75
PALB2-206ENST00000568219 PADI2Q9Y2J8 665 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 WNK3Q9BYP7 1800 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 MN1Q10571 1320 aaPredicted RBP10.34□□□□□ -0.75
PALB2-206ENST00000568219 FAAHO00519 579 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 GABRPO00591 440 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 RAF1P04049 648 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 ELK1P19419 428 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 NTSP30990 170 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 ETV3P41162 512 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 ANXA11P50995 505 aaKnown RBP10.34□□□□□ -0.75
PALB2-206ENST00000568219 EPHA5P54756 1037 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 TOR1AIP1Q5JTV8 583 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 PLBD1Q6P4A8 553 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 TMED4Q7Z7H5 227 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 RDH10Q8IZV5 341 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.75
PALB2-206ENST00000568219 RIOK2Q9BVS4 552 aaKnown RBP10.34□□□□□ -0.75
PALB2-206ENST00000568219 C1QTNF3Q9BXJ4 246 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 QRSL1Q9H0R6 528 aaKnown RBP10.34□□□□□ -0.75
PALB2-206ENST00000568219 SLC39A1Q9NY26 324 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 SLC25A13Q9UJS0 675 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 ENTPD4Q9Y227 616 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 LOC105371267A0A1B0GV96 52 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 PDCD5O14737 125 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 TSPAN6O43657 245 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 KLK8O60259 260 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 M6PRP20645 277 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 HOXC13P31276 330 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 AHRP35869 848 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 CRYBB2P43320 205 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 SGSHP51688 502 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 PER3P56645 1201 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 POLR2LP62875 67 aaKnown RBP10.34□□□□□ -0.75
PALB2-206ENST00000568219 PLK5Q496M5 336 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 TXNDC8Q6A555 127 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 CPOQ8IVL8 374 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 APCDD1Q8J025 514 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 FBXL6Q8N531 539 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 CLDN22Q8N7P3 220 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 OR4M1Q8NGD0 313 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 SLC35G5Q96KT7 338 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 PKMYT1Q99640 499 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 MS4A7Q9GZW8 240 aaPredicted RBP10.34□□□□□ -0.75
PALB2-206ENST00000568219 BTBD1Q9H0C5 482 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 DDX31Q9H8H2 851 aaKnown RBP10.34□□□□□ -0.75
PALB2-206ENST00000568219 BTNL2Q9UIR0 455 aa10.34□□□□□ -0.75
PALB2-206ENST00000568219 A0A0U1RQF3 1178 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 WASH4PA8MWX3 477 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 RFXAPO00287 272 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 OR1F1O43749 312 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 SLC19A2O60779 497 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 ECDO95905 644 aaPredicted RBP10.33□□□□□ -0.76
PALB2-206ENST00000568219 HK1P19367 917 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 RPL4P36578 427 aaKnown RBP10.33□□□□□ -0.76
PALB2-206ENST00000568219 CAMK1Q14012 370 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 PRPF38BQ5VTL8 546 aaKnown RBP10.33□□□□□ -0.76
PALB2-206ENST00000568219 ACSM5Q6NUN0 579 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 RNF44Q7L0R7 432 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 MMP21Q8N119 569 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 NANOGP1Q8N7R0 232 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 FAM98AQ8NCA5 519 aaKnown RBP10.33□□□□□ -0.76
PALB2-206ENST00000568219 FUBP3Q96I24 572 aaKnown RBP eCLIP10.33□□□□□ -0.76
PALB2-206ENST00000568219 FAIM2Q9BWQ8 316 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 COMMD9Q9P000 198 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 PCDHGB7Q9Y5F8 929 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 ARPC1BO15143 372 aaKnown RBP10.33□□□□□ -0.76
PALB2-206ENST00000568219 COCHO43405 550 aa10.33□□□□□ -0.76
PALB2-206ENST00000568219 TCRBP04435 133 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms