RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 JOSD2Q8TAC2 188 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 SLC26A7Q8TE54 656 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TMEM143Q96AN5 459 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 B3GALT6Q96L58 329 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 SPATA13Q96N96 652 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TSNARE1Q96NA8 513 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 KLF6Q99612 283 aaPredicted RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 GFI1Q99684 422 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 KRTAP4-5Q9BYR2 181 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 RPF1Q9H9Y2 349 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 OSER1Q9NX31 292 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ARMCX1Q9P291 453 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 EPG5Q9HCE0 2579 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ATRXP46100 2492 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 LAMA2P24043 3122 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TRAV19A0A0A6YYK7 116 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TRPC5OSA6NMA1 111 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 OGG1O15527 345 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 SPRY3O43610 288 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 BANF1O75531 89 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 SLCO2B1O94956 709 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 NDUFB4O95168 129 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CD48P09326 243 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 GP1BBP13224 206 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 PDGFRAP16234 1089 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 FBLP22087 321 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 GABRR2P28476 465 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 MAGEA8P43361 318 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CLDN20P56880 219 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 NUP107P57740 925 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 PDE1BQ01064 536 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 YWHAHQ04917 246 aaPredicted RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 PRKAA1Q13131 559 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 MSLNQ13421 630 aaPredicted RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 PDK1Q15118 436 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 C2CD6Q53TS8 623 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 SFT2D3Q587I9 215 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 RWDD4Q6NW29 188 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CD300LGQ6UXG3 332 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 HACD2Q6Y1H2 254 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CDHR3Q6ZTQ4 885 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 RAPH1Q70E73 1250 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 SATL1Q86VE3 508 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 UNC93AQ86WB7 457 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ERI1Q8IV48 349 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CHERPQ8IWX8 916 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 DNASE2BQ8WZ79 361 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 FGF11Q92914 225 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 DCUN1D1Q96GG9 259 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CPB2Q96IY4 423 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF578Q96N58 590 aaPredicted RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CPXM1Q96SM3 734 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CDRT15Q96T59 188 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 OLFM1Q99784 485 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 HGH1Q9BTY7 390 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 GTPBP2Q9BX10 602 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 OSBPL11Q9BXB4 747 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 MTMR12Q9C0I1 747 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 IL22Q9GZX6 179 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ILKAPQ9H0C8 392 aaPredicted RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 LRRC40Q9H9A6 602 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TRPC7Q9HCX4 862 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 HPS4Q9NQG7 708 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 DUS2Q9NX74 493 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 NFKBIL1Q9UBC1 381 aaPredicted RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 USP24Q9UPU5 2620 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 LOC102723996A0A087X1L8 192 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CPED1A4D0V7 1026 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TMEM150BA6NC51 233 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 M0QYV0 167 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF195O14628 629 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 HDAC3O15379 428 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 BCAS2O75934 225 aaPredicted RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 STAMBPO95630 424 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 GSRP00390 522 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 APRTP07741 180 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ZCCHC18P0CG32 403 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 SMIM18P0DKX4 95 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ODC1P11926 461 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 MYOD1P15172 320 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF23P17027 643 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ME2P23368 584 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 RPL34P49207 117 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 GPR143P51810 404 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 LIMK2P53671 638 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 AQP4P55087 323 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CD81P60033 236 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 RBP5P82980 135 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 HPCAP84074 193 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 RUNX1T1Q06455 604 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF33AQ06730 810 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 EPS8Q12929 822 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 UGP2Q16851 508 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 KCTD19Q17RG1 926 aaPredicted RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 OTUD1Q5VV17 481 aaPredicted RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ARHGAP17Q68EM7 881 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ALKAL1Q6UXT8 129 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CYP4V2Q6ZWL3 525 aaPredicted RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 STRADAQ7RTN6 431 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms