RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 CSNK2A2P19784 350 aaPredicted RBP9.2□□□□□ -0.94
CMTM3-209ENST00000565003 HSD3B2P26439 372 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 ABCD3P28288 659 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 DEKP35659 375 aaKnown RBP9.2□□□□□ -0.94
CMTM3-209ENST00000565003 KRT6CP48668 564 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 ALDH9A1P49189 494 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 RAE1P78406 368 aaKnown RBP9.2□□□□□ -0.94
CMTM3-209ENST00000565003 HMGCS1Q01581 520 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 MAP4K2Q12851 820 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 CSTF3Q12996 717 aaKnown RBP9.2□□□□□ -0.94
CMTM3-209ENST00000565003 LCP2Q13094 533 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 WLSQ5T9L3 541 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 FNDC7Q5VTL7 733 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 DESI1Q6ICB0 168 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 B3GNT6Q6ZMB0 384 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 MEX3BQ6ZN04 569 aaKnown RBP9.2□□□□□ -0.94
CMTM3-209ENST00000565003 ACAD11Q709F0 780 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 SLC22A9Q8IVM8 553 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 C17orf47Q8NEP4 570 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 LILRB4Q8NHJ6 448 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 NEIL3Q8TAT5 605 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 METTL6Q8TCB7 284 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 ACMSDQ8TDX5 336 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 SARAFQ96BY9 339 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 CTHRC1Q96CG8 243 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 L3HYPDHQ96EM0 354 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 ZNF597Q96LX8 424 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 ZNF681Q96N22 645 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 RILPQ96NA2 401 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 ITPAQ9BY32 194 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 BRINP2Q9C0B6 783 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 GSTO2Q9H4Y5 243 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 ACKR4Q9NPB9 350 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 NMRK1Q9NWW6 199 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 QPCTLQ9NXS2 382 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 ZNF639Q9UID6 485 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 MCM8Q9UJA3 840 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 ACAD8Q9UKU7 415 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 PLLPQ9Y342 182 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 TIMM22Q9Y584 194 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 HCFC1P51610 2035 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 ADGRG4Q8IZF6 3080 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 INTS1Q8N201 2190 aaKnown RBP9.19□□□□□ -0.94
CMTM3-209ENST00000565003 CAPN14A8MX76 684 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 G3V2L1 256 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 UBFD1O14562 309 aaKnown RBP9.19□□□□□ -0.94
CMTM3-209ENST00000565003 PCDH7O60245 1069 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 WDR1O75083 606 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 ULK1O75385 1050 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 ESRRBO95718 433 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 SHBGP04278 402 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 ENO1P06733 434 aaKnown RBP9.19□□□□□ -0.94
CMTM3-209ENST00000565003 ABCB1P08183 1280 aaPredicted RBP9.19□□□□□ -0.94
CMTM3-209ENST00000565003 GSTA1P08263 222 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 IL3P08700 152 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 PCSK2P16519 638 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 GDF1P27539 372 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 MSX1P28360 303 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 HMOX2P30519 316 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 SSTR2P30874 369 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 ADH7P40394 386 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 CASP3P42574 277 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 TRPC1P48995 793 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 TMED10P49755 219 aaKnown RBP9.19□□□□□ -0.94
CMTM3-209ENST00000565003 FOXA1P55317 472 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 NRG3P56975 720 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 KRTAP10-9P60411 292 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 TRA2BP62995 288 aaKnown RBP9.19□□□□□ -0.94
CMTM3-209ENST00000565003 MRPS35P82673 323 aaKnown RBP9.19□□□□□ -0.94
CMTM3-209ENST00000565003 TRMT12Q53H54 448 aaKnown RBP9.19□□□□□ -0.94
CMTM3-209ENST00000565003 TBCELQ5QJ74 424 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 C1orf185Q5T7R7 199 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 TMEM198Q66K66 360 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 SH2D5Q6ZV89 423 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 LIX1LQ8IVB5 337 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 OR52R1Q8NGF1 315 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 OR10Q1Q8NGQ4 319 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 NTNG2Q96CW9 530 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 C11orf24Q96F05 449 aaPredicted RBP9.19□□□□□ -0.94
CMTM3-209ENST00000565003 C14orf79Q96F83 325 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 APIPQ96GX9 242 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 SECISBP2Q96T21 854 aaKnown RBP9.19□□□□□ -0.94
CMTM3-209ENST00000565003 FAIM2Q9BWQ8 316 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 EBPLQ9BY08 206 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 ANGPTL4Q9BY76 406 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 UBQLN3Q9H347 655 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 ALKBH4Q9NXW9 302 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 B4GALT7Q9UBV7 327 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 BCAP29Q9UHQ4 241 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 UTS2RQ9UKP6 389 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 PSME2Q9UL46 239 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 DLGAP4Q9Y2H0 992 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 POLQO75417 2590 aa9.19□□□□□ -0.94
CMTM3-209ENST00000565003 A0A0G2JNJ9 132 aa9.18□□□□□ -0.94
CMTM3-209ENST00000565003 GNG14A0A1W2PPG7 69 aa9.18□□□□□ -0.94
CMTM3-209ENST00000565003 KDM4EB2RXH2 506 aaPredicted RBP9.18□□□□□ -0.94
CMTM3-209ENST00000565003 PDZD2O15018 2839 aa9.18□□□□□ -0.94
CMTM3-209ENST00000565003 GLRA3O75311 464 aa9.18□□□□□ -0.94
CMTM3-209ENST00000565003 NME6O75414 186 aaPredicted RBP9.18□□□□□ -0.94
CMTM3-209ENST00000565003 PPM1BO75688 479 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms