RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 CD68P34810 354 aaPredicted RBP9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 CTBP2P56545 445 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 WNT3AP56704 352 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 CLDN15P56746 228 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 SNRPD2P62316 118 aaKnown RBP9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 KLHL30Q0D2K2 578 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 PON3Q15166 354 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 RPS6KA2Q15349 733 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 FASTKD1Q53R41 847 aaKnown RBP9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 ZNF628Q5EBL2 1059 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 SLC9A4Q6AI14 798 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 TMEM108Q6UXF1 575 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 SSX8Q7RTT4 187 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 ASPGQ86U10 573 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 BCL6BQ8N143 479 aaPredicted RBP9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 OR13C4Q8NGS5 318 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 LINC01006Q8NI28 216 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 SLC2A12Q8TD20 617 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 SLC13A3Q8WWT9 602 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 ATG4AQ8WYN0 398 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 KISS1RQ969F8 398 aaPredicted RBP9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 FBXO17Q96EF6 278 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 RNF157Q96PX1 679 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 SMARCAL1Q9NZC9 954 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 IP6K2Q9UHH9 426 aa9.28□□□□□ -0.92
HDGFL3-204ENST00000563790 A0A087X0T9 212 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 SYCE3A1L190 88 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 SYNDIG1LA6NDD5 238 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 H7BY64 318 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 SS18L1O75177 396 aaPredicted RBP9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 AQP8O94778 261 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 SLU7O95391 586 aaKnown RBP9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 FAM228BP0C875 321 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 FCGR2AP12318 317 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 PTAFRP25105 342 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 CCR7P32248 378 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 HSD17B7P56937 341 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 RASGEF1BQ0VAM2 473 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 PDK2Q15119 407 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 LCTLQ6UWM7 567 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 PACS1Q6VY07 963 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 SLC46A3Q7Z3Q1 461 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 CCNYQ8ND76 341 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 SPPL2AQ8TCT8 520 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 WDR60Q8WVS4 1066 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 GMPPAQ96IJ6 420 aaPredicted RBP9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 NAP1L5Q96NT1 182 aaPredicted RBP9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 PRAP1Q96NZ9 151 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 C19orf43Q9BQ61 176 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 ACTR8Q9H981 624 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 PLEK2Q9NYT0 353 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 MCM8Q9UJA3 840 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 FBXO9Q9UK97 447 aaPredicted RBP9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 NUP50Q9UKX7 468 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 GRID1Q9ULK0 1009 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 TSC22D4Q9Y3Q8 395 aa9.27□□□□□ -0.93
HDGFL3-204ENST00000563790 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 A0A1B0GTH6 734 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 C5orf60A6NFR6 353 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 ZNF487B1APH4 448 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 H0YC42 278 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 PROSCO94903 275 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 ALOX5P09917 674 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 OR56A5P0C7T3 313 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 ANPEPP15144 967 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 KDELR1P24390 212 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 MC4RP32245 332 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 CASP3P42574 277 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 TNNT3P45378 269 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 LMO4P61968 165 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 CDK5R2Q13319 367 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 MSLNQ13421 630 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 DCAF12L2Q5VW00 463 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 ZFAND6Q6FIF0 208 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 CES3Q6UWW8 571 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 NPNTQ6UXI9 565 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 C9orf40Q8IXQ3 194 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 Q8NFD4 153 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 ZNF721Q8TF20 911 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 DTNBP1Q96EV8 351 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 OXNAD1Q96HP4 312 aaPredicted RBP9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 MAP6Q96JE9 813 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 MRGPRX2Q96LB1 330 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 SFXN2Q96NB2 322 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 GORASP1Q9BQQ3 440 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 ALOXE3Q9BYJ1 711 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 GLOD4Q9HC38 313 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 TMEM184CQ9NVA4 438 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 TAS2R10Q9NYW0 307 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 TREM2Q9NZC2 230 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 COPS7AQ9UBW8 275 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 FAM153AQ9UHL3 310 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 UTS2RQ9UKP6 389 aa9.26□□□□□ -0.93
HDGFL3-204ENST00000563790 RGS14O43566 566 aa9.25□□□□□ -0.93
HDGFL3-204ENST00000563790 CDH16O75309 829 aa9.25□□□□□ -0.93
HDGFL3-204ENST00000563790 ZFPL1O95159 310 aa9.25□□□□□ -0.93
HDGFL3-204ENST00000563790 SAGP10523 405 aaPredicted RBP9.25□□□□□ -0.93
HDGFL3-204ENST00000563790 FUT4P22083 530 aa9.25□□□□□ -0.93
HDGFL3-204ENST00000563790 GATA3P23771 443 aa9.25□□□□□ -0.93
HDGFL3-204ENST00000563790 CD40P25942 277 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms