RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ERI1Q8IV48 349 aaKnown RBP2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 LINC00518Q8N0U6 118 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 NUP93Q8N1F7 819 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 CCDC89Q8N998 374 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 COG3Q96JB2 828 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 SPAG8Q99932 426 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 NTMT1Q9BV86 223 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 ELOVL4Q9GZR5 314 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 KCNMB3Q9NPA1 279 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 ESM1Q9NQ30 184 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 CENPMQ9NSP4 180 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 SEPT10Q9P0V9 454 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 SLC2A6Q9UGQ3 507 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 ARMCX3Q9UH62 379 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 NRBP1Q9UHY1 535 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 TEKT2Q9UIF3 430 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 FBXL5Q9UKA1 691 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 KLK12Q9UKR0 248 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 CDH7Q9ULB5 785 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 EXOC7Q9UPT5 735 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 FLVCR1Q9Y5Y0 555 aa2.03□□□□□ -2.08
HMGB1P33-201ENST00000563485 FAM149AA5PLN7 773 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 TRIM49D1C9J1S8 452 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 SLU7O95391 586 aaKnown RBP2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 TXNDC12O95881 172 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 IGHV3-23P01764 117 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 ALOX5P09917 674 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 FUT3P21217 361 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 ALDH3B2P48448 385 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 SLC12A3P55017 1021 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 VCPP55072 806 aaKnown RBP2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 ZNF85Q03923 595 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 KLF5Q13887 457 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 SGCBQ16585 318 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 KYAT1Q16773 422 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 HAGHQ16775 308 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 NHSL2Q5HYW2 709 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 TCHHL1Q5QJ38 904 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 MSANTD1Q6ZTZ1 278 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 SIAH3Q8IW03 269 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 OR6M1Q8NGM8 313 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 UBTD2Q8WUN7 234 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 HAS2Q92819 552 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 AP2M1Q96CW1 435 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 PANX3Q96QZ0 392 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 THUMPD3Q9BV44 507 aaKnown RBP2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 EDEM3Q9BZQ6 932 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 SLC26A1Q9H2B4 701 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 TUBGCP4Q9UGJ1 667 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 DIMT1Q9UNQ2 313 aaKnown RBP2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 KCNK6Q9Y257 313 aa2.02□□□□□ -2.09
HMGB1P33-201ENST00000563485 KIF7Q2M1P5 1343 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 YJEFN3A6XGL0 299 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 CYB561D2O14569 222 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 TYROBPO43914 113 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 LCMT2O60294 686 aaKnown RBP2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 CPA3P15088 417 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 UGT1A6P19224 532 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 SAA4P35542 130 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 HAND2P61296 217 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 RPS4XP62701 263 aaKnown RBP2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 HERPUD1Q15011 391 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 KRT31Q15323 416 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 CD226Q15762 336 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 DCAF4L1Q3SXM0 396 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 GLYR1Q49A26 553 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 CCDC14Q49A88 953 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 SBK1Q52WX2 424 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 MPPE1Q53F39 396 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 TFDP3Q5H9I0 405 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 RTL6Q6ICC9 239 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 IRGCQ6NXR0 463 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 FAM47EQ6ZV65 393 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 MOB1BQ7L9L4 216 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 KRT77Q7Z794 578 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 TUSC5Q8IXB3 177 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 ATAD1Q8NBU5 361 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 OR7G3Q8NG95 312 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 RFESDQ8TAC1 157 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 DEPDC1BQ8WUY9 529 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 GLYATL1Q969I3 302 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 SLC25A38Q96DW6 304 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 PLEKHF1Q96S99 279 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 MLPHQ9BV36 600 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 HCAR1Q9BXC0 346 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 DCTPP1Q9H773 170 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 NRN1Q9NPD7 142 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 HPS4Q9NQG7 708 aa2.01□□□□□ -2.09
HMGB1P33-201ENST00000563485 SH2D1BO14796 132 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 TTI1O43156 1089 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 RTN2O75298 545 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 CRCPO75575 148 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 PDE5AO76074 875 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 GAS8O95995 478 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 PSG2P11465 335 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 IGHV1-2P23083 117 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 CDKL1Q00532 357 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 EBI3Q14213 229 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 RPS6KA1Q15418 735 aa2□□□□□ -2.09
HMGB1P33-201ENST00000563485 TRADDQ15628 312 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms