RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 RPL35P42766 123 aaKnown RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 PCDH1Q08174 1060 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 PTPRRQ15256 657 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 UGT3A2Q3SY77 523 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 KIAA0907Q7Z7F0 614 aaPredicted RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 POC5Q8NA72 575 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 FAM98AQ8NCA5 519 aaKnown RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 MR1Q95460 341 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 CCDC115Q96NT0 180 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 LPAR4Q99677 370 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 C6orf62Q9GZU0 229 aaPredicted RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 OAZ3Q9UMX2 235 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 POLHQ9Y253 713 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 PCDHGB1Q9Y5G3 927 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 POLR1CO15160 346 aaPredicted RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 PABPC4LP0CB38 370 aaKnown RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 NPTX1Q15818 432 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 DEFB133Q30KQ1 61 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 KLHL22Q53GT1 634 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 XKR7Q5GH72 579 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 RBM48Q5RL73 367 aaKnown RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 RPL13AP3Q6NVV1 102 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 KBTBD2Q8IY47 623 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 ALDH16A1Q8IZ83 802 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 CRIPAKQ8N1N5 446 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 MOCOSQ96EN8 888 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 HS6ST2Q96MM7 605 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 COPS4Q9BT78 406 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 SGPP1Q9BX95 441 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 OR8D2Q9GZM6 311 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 RACGAP1Q9H0H5 632 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 MBNL1Q9NR56 388 aaKnown RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 TMEM181Q9P2C4 612 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 LRIT1Q9P2V4 623 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 MED31Q9Y3C7 131 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 NOX1Q9Y5S8 564 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 FAAHO00519 579 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 ZNF821O75541 412 aaPredicted RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 CD160O95971 181 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 C8orf89P0DMQ9 161 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 UGT2B7P16662 529 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 VAMP1P23763 118 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 RYKP34925 604 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 PXNP49023 591 aaPredicted RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 MVKQ03426 396 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.16□□□□□ -1.26
TCF4-216ENST00000562680 ANKRD26P1Q6NSI1 321 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 RNF44Q7L0R7 432 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 TMEFF1Q8IYR6 380 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 OR10H5Q8NGA6 315 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 OR52E4Q8NGH9 312 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 OR4C6Q8NH72 309 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 TMEM125Q96AQ2 219 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 OR52A5Q9H2C5 316 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 SEMA6CQ9H3T2 930 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 FTSJ1Q9UET6 329 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 RPL36Q9Y3U8 105 aaKnown RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 PCDHGB7Q9Y5F8 929 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 TRIM3O75382 744 aaPredicted RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 KLHL18O94889 574 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 MT-ND1P03886 318 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 IL1RNP18510 177 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 YAP1P46937 504 aaKnown RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 OR4D2P58180 307 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 PFN3P60673 137 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 PSPHP78330 225 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 SHC2P98077 582 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 ZNF45Q02386 682 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 C14orf28Q4W4Y0 310 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 CRB2Q5IJ48 1285 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 RASSF6Q6ZTQ3 369 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 TTLL10Q6ZVT0 673 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 JPH3Q8WXH2 748 aaPredicted RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 YIPF4Q9BSR8 244 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 NPLQ9BXD5 320 aaPredicted RBP7.16□□□□□ -1.26
TCF4-216ENST00000562680 UCK2Q9BZX2 261 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 OR51I1Q9H343 314 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 PTGES2Q9H7Z7 377 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 NLGN3Q9NZ94 848 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.16□□□□□ -1.26
TCF4-216ENST00000562680 BTBD3Q9Y2F9 522 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 PCDHGA7Q9Y5G6 932 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 PMF1-BGLAPU3KQ54 211 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 SHROOM3Q8TF72 1996 aa7.16□□□□□ -1.26
TCF4-216ENST00000562680 METTL12A8MUP2 240 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 H0YAE9 185 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 NME4O00746 187 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 TAPBPO15533 448 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 SDC3O75056 442 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 PPM1BO75688 479 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 STATHP02808 62 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 RHCEP18577 417 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 GPR85P60893 370 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 TARDBPQ13148 414 aaKnown RBP eCLIP7.15□□□□□ -1.26
TCF4-216ENST00000562680 CYHR1Q6ZMK1 362 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 USP53Q70EK8 1073 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 OAFQ86UD1 273 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 VRK3Q8IV63 474 aa7.15□□□□□ -1.26
TCF4-216ENST00000562680 ZNF595Q8IYB9 648 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms