RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 CR1P17927 2039 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 HMGB1P1B2RPK0 211 aaPredicted RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 GOLGA8MH3BSY2 632 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 RTCAO00442 366 aaKnown RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 PLOD2O00469 737 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 HS3ST1O14792 307 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 EMC8O43402 210 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 KLF4O43474 513 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 ICOSLGO75144 302 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 TTC4O95801 387 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 TGM6O95932 706 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 TBX6O95947 436 aaPredicted RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 TGFB1P01137 390 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 KRT14P02533 472 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 PROCP04070 461 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 FESP07332 822 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 ABCB1P08183 1280 aaPredicted RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 CCDC175P0C221 793 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 RHOXF2BP0C7M4 288 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 SLC35E2BP0CK96 405 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 SLC35E2P0CK97 266 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 LOXP28300 417 aaPredicted RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 GABRB3P28472 473 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 SOX18P35713 384 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 BUD31P41223 144 aaPredicted RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 GDF5P43026 501 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 SSR2P43308 183 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 STARP49675 285 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 VPS41P49754 854 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 EEFSECP57772 596 aaKnown RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 RPS13P62277 151 aaKnown RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 RUNX1T1Q06455 604 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 SNTA1Q13424 505 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 BCL2A1Q16548 175 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 KRTAP24-1Q3LI83 254 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 ANKRD22Q5VYY1 191 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 ANKRD34AQ69YU3 496 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 OR4C11Q6IEV9 310 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 FAM45BPQ6NSW5 357 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 TMEM81Q6P7N7 255 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 VWA1Q6PCB0 445 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 RAD9BQ6WBX8 426 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 ZNF793Q6ZN11 406 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 ZNF704Q6ZNC4 412 aaPredicted RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 DGAT2L6Q6ZPD8 337 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 FRA10AC1Q70Z53 315 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 ZNF550Q7Z398 422 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 VN1R5Q7Z5H4 357 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 GALNT7Q86SF2 657 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 IFNEQ86WN2 208 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 TCAIMQ8N3R3 496 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 SNX31Q8N9S9 440 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 ZNF610Q8N9Z0 462 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 RDH11Q8TC12 318 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 FAM45AQ8TCE6 357 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 DOK4Q8TEW6 326 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 GTPBP3Q969Y2 492 aaKnown RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 RGMAQ96B86 450 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 WDR34Q96EX3 536 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 PTCD3Q96EY7 689 aaKnown RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 MARK4Q96L34 752 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 CENPKQ9BS16 269 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 RHNO1Q9BSD3 238 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 EFCAB11Q9BUY7 163 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 C19orf24Q9BVV8 132 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 OR2B2Q9GZK3 357 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 OPN3Q9H1Y3 402 aaPredicted RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 CNOT10Q9H9A5 744 aaKnown RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 WDR41Q9HAD4 459 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 LRTM1Q9HBL6 345 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 PPANQ9NQ55 473 aaKnown RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 DNAJC11Q9NVH1 559 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 TAS2R10Q9NYW0 307 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 CTNNAL1Q9UBT7 734 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 LPAR3Q9UBY5 353 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 PHF11Q9UIL8 331 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 CORO1CQ9ULV4 474 aaPredicted RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 RNF112Q9ULX5 631 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 PROCRQ9UNN8 238 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 LAMP3Q9UQV4 416 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 CFL2Q9Y281 166 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 MRPS18CQ9Y3D5 142 aaKnown RBP4.69□□□□□ -1.66
SPG11-208ENST00000558155 OARD1Q9Y530 152 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 WIF1Q9Y5W5 379 aa4.69□□□□□ -1.66
SPG11-208ENST00000558155 VPS13CQ709C8 3753 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 UQCRHLA0A096LP55 91 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.68□□□□□ -1.66
SPG11-208ENST00000558155 SLC22A20A6NK97 555 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 OVOL3O00110 214 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 HCRTR2O43614 444 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 RRP9O43818 475 aaKnown RBP4.68□□□□□ -1.66
SPG11-208ENST00000558155 SH3BGRLO75368 114 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 PPM1BO75688 479 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 STK16O75716 305 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 SCELO95171 688 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 PLAUP00749 431 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 FGGP02679 453 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 CD8BP10966 210 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 PCNAP12004 261 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms