RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 NAGLUP54802 743 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 ADAM8P78325 824 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 C2orf54Q08AI8 447 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 MGAT2Q10469 447 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 WIPI1Q5MNZ9 446 aaPredicted RBP14.56□□□□□ -0.08
SCFD1-224ENST00000557713 TMEM81Q6P7N7 255 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 KIF18BQ86Y91 864 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 OR52B6Q8NGF0 335 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 ABTB1Q969K4 478 aaPredicted RBP14.56□□□□□ -0.08
SCFD1-224ENST00000557713 TRIB1Q96RU8 372 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 NTMT1Q9BV86 223 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 NXF5Q9H1B4 397 aaKnown RBP14.56□□□□□ -0.08
SCFD1-224ENST00000557713 CALHM2Q9HA72 323 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 CPSF2Q9P2I0 782 aaKnown RBP14.56□□□□□ -0.08
SCFD1-224ENST00000557713 ADAM29Q9UKF5 820 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 CES1P1Q9UKY3 287 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 PYCARDQ9ULZ3 195 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 DTX4Q9Y2E6 619 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 RPH3AQ9Y2J0 694 aaPredicted RBP14.56□□□□□ -0.08
SCFD1-224ENST00000557713 ANKHD1Q8IWZ3 2542 aaKnown RBP14.56□□□□□ -0.08
SCFD1-224ENST00000557713 FREM3P0C091 2139 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 VPS13CQ709C8 3753 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 KIAA1549Q9HCM3 1950 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 TUBAL3A6NHL2 446 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 GNB5O14775 395 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 CDH16O75309 829 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 PPM1BO75688 479 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 IL18BPO95998 194 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 PORP16435 677 aaPredicted RBP14.55□□□□□ -0.08
SCFD1-224ENST00000557713 NT5EP21589 574 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 AGFG1P52594 562 aaKnown RBP14.55□□□□□ -0.08
SCFD1-224ENST00000557713 DGKQP52824 942 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 MAP4K2Q12851 820 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 TECRLQ5HYJ1 363 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 FRG2Q64ET8 278 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 DESI1Q6ICB0 168 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 PAMR1Q6UXH9 720 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 NUP54Q7Z3B4 507 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 FAM83FQ8NEG4 500 aaPredicted RBP14.55□□□□□ -0.08
SCFD1-224ENST00000557713 OR1J4Q8NGS1 313 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 LINC01560Q8TB33 94 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 ZPLD1Q8TCW7 415 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 HGDQ93099 445 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 MRRFQ96E11 262 aaKnown RBP14.55□□□□□ -0.08
SCFD1-224ENST00000557713 FRG2BQ96QU4 278 aa14.55□□□□□ -0.08
SCFD1-224ENST00000557713 GSX1Q9H4S2 264 aaPredicted RBP14.55□□□□□ -0.08
SCFD1-224ENST00000557713 ATE1O95260 518 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 ACTL6AO96019 429 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 ALDOAP04075 364 aaKnown RBP14.54□□□□□ -0.08
SCFD1-224ENST00000557713 CPN1P15169 458 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 TYK2P29597 1187 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 OPRM1P35372 400 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 SOX18P35713 384 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 PTGDSP41222 190 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 SLCO1A2P46721 670 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 SORDQ00796 357 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 TOMM20Q15388 145 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 PRICKLE4Q2TBC4 344 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 CCNYL2Q5T2Q4 361 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 SLC30A6Q6NXT4 461 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 KLC3Q6P597 504 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 FAM111BQ6SJ93 734 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 YRDCQ86U90 279 aaKnown RBP14.54□□□□□ -0.08
SCFD1-224ENST00000557713 PLD6Q8N2A8 252 aaKnown RBP14.54□□□□□ -0.08
SCFD1-224ENST00000557713 METTL4Q8N3J2 472 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 PTGR2Q8N8N7 351 aaPredicted RBP14.54□□□□□ -0.08
SCFD1-224ENST00000557713 C9orf106Q8NAJ2 232 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 TRPC4APQ8TEL6 797 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 ATP6V1E2Q96A05 226 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 NODALQ96S42 347 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 MRPL1Q9BYD6 325 aaKnown RBP14.54□□□□□ -0.08
SCFD1-224ENST00000557713 RAB17Q9H0T7 212 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 PLEKHF2Q9H8W4 249 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 ZBTB26Q9HCK0 441 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 AHSPQ9NZD4 102 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 ZNF639Q9UID6 485 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 PCDHA9Q9Y5H5 950 aa14.54□□□□□ -0.08
SCFD1-224ENST00000557713 AKAP6Q13023 2319 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 C1orf226A1L170 272 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 SNPHO15079 494 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 ICOSLGO75144 302 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 RAF1P04049 648 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 ATP1B1P05026 303 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 KRT15P19012 456 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 SERPINB8P50452 374 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 CCNG1P51959 295 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 TRAF3Q13114 568 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 DEFB113Q30KQ7 82 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 C10orf62Q5T681 223 aaPredicted RBP14.53□□□□□ -0.08
SCFD1-224ENST00000557713 C6orf163Q5TEZ5 329 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 SLC48A1Q6P1K1 146 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 ANGPTL8Q6UXH0 198 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 PAGE2Q7Z2X7 111 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 VWA5B2Q8N398 1253 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 SIMC1Q8NDZ2 872 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 PHF21BQ96EK2 531 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 METTL7AQ9H8H3 244 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 MAT2BQ9NZL9 334 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 PCTPQ9UKL6 214 aa14.53□□□□□ -0.08
SCFD1-224ENST00000557713 CFL2Q9Y281 166 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms