RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 LIPNQ5VXI9 398 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 NKAIN2Q5VXU1 208 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 SPECC1LQ69YQ0 1117 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 CAPN13Q6MZZ7 669 aaPredicted RBP3.01□□□□□ -1.93
FOXN3-217ENST00000557572 TTC27Q6P3X3 843 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 KCTD8Q6ZWB6 473 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 EIF3MQ7L2H7 374 aaKnown RBP3.01□□□□□ -1.93
FOXN3-217ENST00000557572 ARHGAP22Q7Z5H3 698 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 LINC00523Q86TU6 105 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 SLC22A16Q86VW1 577 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 PAQR7Q86WK9 346 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 CCDC25Q86WR0 208 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 CBWD2Q8IUF1 395 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 CROCCP3Q8IVE0 287 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.01□□□□□ -1.93
FOXN3-217ENST00000557572 LYG1Q8N1E2 194 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 BEST3Q8N1M1 668 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 PYROXD2Q8N2H3 581 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 DNAAF3Q8N9W5 541 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 SMYD1Q8NB12 490 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 SLC38A9Q8NBW4 561 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 PAPD5Q8NDF8 572 aaKnown RBP3.01□□□□□ -1.93
FOXN3-217ENST00000557572 TRPV1Q8NER1 839 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 HMGCLL1Q8TB92 370 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 RAET1EQ8TD07 263 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 GPX8Q8TED1 209 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 CACNG8Q8WXS5 425 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 ST8SIA1Q92185 356 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 TM4SF19Q96DZ7 209 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 PGLYRP2Q96PD5 576 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 TRNT1Q96Q11 434 aaKnown RBP3.01□□□□□ -1.93
FOXN3-217ENST00000557572 VPS35Q96QK1 796 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 PRMT1Q99873 361 aaKnown RBP3.01□□□□□ -1.93
FOXN3-217ENST00000557572 TMEM39BQ9GZU3 492 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 MFFQ9GZY8 342 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 PPP1R3EQ9H7J1 279 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 PCDH9Q9HC56 1237 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 ZNF275Q9NSD4 429 aaPredicted RBP3.01□□□□□ -1.93
FOXN3-217ENST00000557572 ZFP57Q9NU63 452 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 DDX28Q9NUL7 540 aaKnown RBP3.01□□□□□ -1.93
FOXN3-217ENST00000557572 CISD1Q9NZ45 108 aaKnown RBP3.01□□□□□ -1.93
FOXN3-217ENST00000557572 TXNDC16Q9P2K2 825 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 HMGXB4Q9UGU5 601 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 NARFQ9UHQ1 456 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 LCMT1Q9UIC8 334 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 ZNF639Q9UID6 485 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 GGA2Q9UJY4 613 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 ACSL5Q9ULC5 683 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 ERVK-19Q9WJR5 959 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 RUVBL2Q9Y230 463 aaKnown RBP3.01□□□□□ -1.93
FOXN3-217ENST00000557572 WDR83OSQ9Y284 106 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 PIGLQ9Y2B2 252 aa3.01□□□□□ -1.93
FOXN3-217ENST00000557572 SNTNA6NMZ2 147 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 F8VVB4 439 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 F8VWA3 439 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 EEF2KO00418 725 aaKnown RBP3□□□□□ -1.93
FOXN3-217ENST00000557572 SCAMP2O15127 329 aaKnown RBP3□□□□□ -1.93
FOXN3-217ENST00000557572 NBR2O15453 112 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 TIMM8AO60220 97 aaPredicted RBP3□□□□□ -1.93
FOXN3-217ENST00000557572 CLDN7O95471 211 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 EGFP01133 1207 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 LYNP07948 512 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 KRT19P08727 400 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 TFPIP10646 304 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 GOT1P17174 413 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 MAOAP21397 527 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 NT5EP21589 574 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 GJB2P29033 226 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 HNRNPH3P31942 346 aaKnown RBP3□□□□□ -1.93
FOXN3-217ENST00000557572 DUTP33316 252 aaKnown RBP3□□□□□ -1.93
FOXN3-217ENST00000557572 CD80P33681 288 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 EVI2BP34910 448 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 SLC9A3P48764 834 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 POU3F4P49335 361 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 CSRP3P50461 194 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 RAB9AP51151 201 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 MMP15P51511 669 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 CD81P60033 236 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 RAB11AP62491 216 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 CSNK2A1P68400 391 aaPredicted RBP3□□□□□ -1.93
FOXN3-217ENST00000557572 ZFP36L1Q07352 338 aaKnown RBP3□□□□□ -1.93
FOXN3-217ENST00000557572 NFATC2Q13469 925 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 CDH18Q13634 790 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 RCAN2Q14206 197 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 NONOQ15233 471 aaKnown RBP eCLIP3□□□□□ -1.93
FOXN3-217ENST00000557572 RAB11BQ15907 218 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 BCL2A1Q16548 175 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 TATDN3Q17R31 274 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 AMZ1Q400G9 498 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 LINC01620Q4KN68 170 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 SYT14P1Q58G82 188 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 ENTPD8Q5MY95 495 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 CTSL3PQ5NE16 218 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 RAET1LQ5VY80 246 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 CLEC6AQ6EIG7 209 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 RNASEKQ6P5S7 137 aaKnown RBP3□□□□□ -1.93
FOXN3-217ENST00000557572 CCDC137Q6PK04 289 aaKnown RBP3□□□□□ -1.93
FOXN3-217ENST00000557572 Q6ZSV7 163 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 CDHR3Q6ZTQ4 885 aa3□□□□□ -1.93
FOXN3-217ENST00000557572 COPS6Q7L5N1 327 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms