RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CPSF7Q8N684 471 aaKnown RBP11.41□□□□□ -0.58
SYNE2-214ENST00000554928 FNDC5Q8NAU1 212 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 OR7A2PQ8NGA2 310 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 OR5L2Q8NGL0 311 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 ZNF675Q8TD23 568 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 ASB15Q8WXK1 588 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 C5orf34Q96MH7 638 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 AMDHD1Q96NU7 426 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 BBS4Q96RK4 519 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 NXF5Q9H1B4 397 aaKnown RBP11.41□□□□□ -0.58
SYNE2-214ENST00000554928 TSPAN10Q9H1Z9 355 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-214ENST00000554928 REEP4Q9H6H4 257 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 WDR55Q9H6Y2 383 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-214ENST00000554928 MIEF1Q9NQG6 463 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 TAS2R7Q9NYW3 318 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 TMED5Q9Y3A6 229 aa11.41□□□□□ -0.58
SYNE2-214ENST00000554928 GCN1Q92616 2671 aaKnown RBP11.4□□□□□ -0.58
SYNE2-214ENST00000554928 GOLGA8QA0A0J9YX86 632 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 C2orf92A0A1B0GVN3 265 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 GOLGA8OA6NCC3 632 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 OR6C76A6NM76 312 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 A8MVJ9 347 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 GOLGA8NF8WBI6 632 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 RASAL1O95294 804 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 CCL3P10147 92 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 G6PDP11413 515 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 CD46P15529 392 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 MC3RP41968 323 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 GSTM5P46439 218 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 CDK9P50750 372 aaKnown RBP11.4□□□□□ -0.58
SYNE2-214ENST00000554928 TDGF1P3P51864 188 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 SRSF1Q07955 248 aaKnown RBP eCLIP11.4□□□□□ -0.58
SYNE2-214ENST00000554928 ZNF791Q3KP31 576 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-214ENST00000554928 TMEM107Q6UX40 140 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 NPSR1Q6W5P4 371 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 WDR53Q7Z5U6 358 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-214ENST00000554928 WDR75Q8IWA0 830 aaKnown RBP11.4□□□□□ -0.58
SYNE2-214ENST00000554928 SULF2Q8IWU5 870 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 FAM9CQ8IZT9 166 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 C7orf57Q8NEG2 295 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 OR7G1Q8NGA0 311 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 OR5M3Q8NGP4 307 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 FAR1Q8WVX9 515 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 PPCDCQ96CD2 204 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 MAGED4Q96JG8 741 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 FRMD6Q96NE9 622 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 MEAF6Q9HAF1 191 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 SH2D2AQ9NP31 389 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 SLCO1B3Q9NPD5 702 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 GIMAP4Q9NUV9 329 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 THAP1Q9NVV9 213 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 HPF1Q9NWY4 346 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 ERVK-11Q9UQG0 969 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 WBP11Q9Y2W2 641 aaKnown RBP11.4□□□□□ -0.58
SYNE2-214ENST00000554928 TENM4Q6N022 2769 aa11.4□□□□□ -0.58
SYNE2-214ENST00000554928 ASPDHA6ND91 283 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 HMGB1P1B2RPK0 211 aaPredicted RBP11.39□□□□□ -0.59
SYNE2-214ENST00000554928 ZNF195O14628 629 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 SCAMP2O15127 329 aaKnown RBP11.39□□□□□ -0.59
SYNE2-214ENST00000554928 PDPK1O15530 556 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 PEX1O43933 1283 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 TBX19O60806 448 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 CBX6O95503 412 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 ALDOCP09972 364 aaKnown RBP11.39□□□□□ -0.59
SYNE2-214ENST00000554928 FBXO45P0C2W1 286 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 LAMP1P11279 417 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 PIGAP37287 484 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 MEOX1P50221 254 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 CORO7P57737 925 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 FBXW4P57775 412 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 PPP2R2AP63151 447 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 EMX2Q04743 252 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 HSPB3Q12988 150 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 SLC9B1Q4ZJI4 515 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 C6orf163Q5TEZ5 329 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 BICRALQ6AI39 1079 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 FAM180AQ6UWF9 173 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 LARP4Q71RC2 724 aaKnown RBP eCLIP11.39□□□□□ -0.59
SYNE2-214ENST00000554928 RIMKLAQ8IXN7 391 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 BCORP1Q8N888 145 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 PSD4Q8NDX1 1056 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 OR10G3Q8NGC4 313 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 SLX1AQ9BQ83 275 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 PROK2Q9HC23 129 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 OLAHQ9NV23 265 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.39□□□□□ -0.59
SYNE2-214ENST00000554928 SH3BP4Q9P0V3 963 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 ATP6V1HQ9UI12 483 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 PCDHGB6Q9Y5F9 930 aa11.39□□□□□ -0.59
SYNE2-214ENST00000554928 PRRC2CQ9Y520 2896 aaKnown RBP11.39□□□□□ -0.59
SYNE2-214ENST00000554928 C9JVG2 144 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 UPK1AO00322 258 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 KLF11O14901 512 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 PLOD3O60568 738 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 VPS4BO75351 444 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 CT45A8P0DMV1 189 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 CT45A9P0DMV2 189 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 EPHA3P29320 983 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 NTSP30990 170 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 MPIP34949 423 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms