RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 OR9Q2Q8NGE9 314 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 COQ8AQ8NI60 647 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 LINC01599Q8WXQ3 324 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 RFT1Q96AA3 541 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 SENP5Q96HI0 755 aaPredicted RBP14.84□□□□□ -0.03
SYNE3-203ENST00000554873 PIP5K1AQ99755 562 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 DOHHQ9BU89 302 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 NLNQ9BYT8 704 aa14.84□□□□□ -0.03
SYNE3-203ENST00000554873 STK25O00506 426 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 SLC19A2O60779 497 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 STK16O75716 305 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 LRATO95237 230 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 EPORP19235 508 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 CDH12P55289 794 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 RBBP4Q09028 425 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 PAQR6Q6TCH4 344 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 QSOX2Q6ZRP7 698 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 FGD2Q7Z6J4 655 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 ZBTB2Q8N680 514 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 SPPL2AQ8TCT8 520 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 UBTD2Q8WUN7 234 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 LRRC46Q96FV0 321 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 C10orf90Q96M02 699 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 IL4I1Q96RQ9 567 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 DPH2Q9BQC3 489 aaPredicted RBP14.83□□□□□ -0.04
SYNE3-203ENST00000554873 RPL36Q9Y3U8 105 aaKnown RBP14.83□□□□□ -0.04
SYNE3-203ENST00000554873 BRCA2P51587 3418 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 CLDN9O95484 217 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 CHRM5P08912 532 aaPredicted RBP14.83□□□□□ -0.04
SYNE3-203ENST00000554873 POU2F1P14859 743 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 SNRPGP62308 76 aaKnown RBP14.83□□□□□ -0.04
SYNE3-203ENST00000554873 KCNA10Q16322 511 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 THAP7Q9BT49 309 aaPredicted RBP14.83□□□□□ -0.04
SYNE3-203ENST00000554873 TINAGL1Q9GZM7 467 aaPredicted RBP14.83□□□□□ -0.04
SYNE3-203ENST00000554873 IL26Q9NPH9 171 aa14.83□□□□□ -0.04
SYNE3-203ENST00000554873 YARS2Q9Y2Z4 477 aaKnown RBP14.83□□□□□ -0.04
SYNE3-203ENST00000554873 FCF1Q9Y324 198 aaKnown RBP14.83□□□□□ -0.04
SYNE3-203ENST00000554873 SPIN1Q9Y657 262 aaPredicted RBP14.83□□□□□ -0.04
SYNE3-203ENST00000554873 TCRBP04435 133 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 IFNA4P05014 189 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 CYBAP13498 195 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 CORO1AP31146 461 aaKnown RBP14.82□□□□□ -0.04
SYNE3-203ENST00000554873 GSTM5P46439 218 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 CRISP1P54107 249 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 KIAA1024LP59773 190 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 RPS25P62851 125 aaKnown RBP14.82□□□□□ -0.04
SYNE3-203ENST00000554873 NFATC2Q13469 925 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 C17orf99Q6UX52 265 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 RAB11FIP2Q7L804 512 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 SHFQ7M4L6 423 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 ZER1Q7Z7L7 766 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 SCARB1Q8WTV0 552 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 WBP2Q969T9 261 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 GTPBP3Q969Y2 492 aaKnown RBP14.82□□□□□ -0.04
SYNE3-203ENST00000554873 MRPS24Q96EL2 167 aaKnown RBP14.82□□□□□ -0.04
SYNE3-203ENST00000554873 DNTTIP1Q9H147 329 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 LATS2Q9NRM7 1088 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 PRKAG2Q9UGJ0 569 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 ERVK-19Q9WJR5 959 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 LANCL1O43813 399 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 NDUFS6O75380 124 aaKnown RBP14.82□□□□□ -0.04
SYNE3-203ENST00000554873 PEPDP12955 493 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 CRYBA2P53672 197 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 SP140Q13342 867 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 TMEM201Q5SNT2 666 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 CHST9Q7L1S5 443 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 OR52N1Q8NH53 320 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 SELENOMQ8WWX9 145 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 NELL1Q92832 810 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 SGK3Q96BR1 496 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 MS4A3Q96HJ5 214 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 ZNF768Q9H5H4 540 aaKnown RBP14.82□□□□□ -0.04
SYNE3-203ENST00000554873 EVA1AQ9H8M9 152 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 DNAJC27Q9NZQ0 273 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 GPR160Q9UJ42 338 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 SLC6A5Q9Y345 797 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 AP1M2Q9Y6Q5 423 aa14.82□□□□□ -0.04
SYNE3-203ENST00000554873 POM121CA8CG34 1229 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 D6RAR5 112 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 COCHO43405 550 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 SSNA1O43805 119 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 STC2O76061 302 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 SDC1P18827 310 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 CTGFP29279 349 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 CALCRP30988 508 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 RHOAP61586 193 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 ST3GAL2Q16842 350 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 SWI5Q1ZZU3 235 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 HFEQ30201 348 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 SYNPOQ8N3V7 929 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 ZNF454Q8N9F8 522 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 OR6K2Q8NGY2 324 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 SOCS4Q8WXH5 440 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 ADAMTS14Q8WXS8 1223 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 NKX6-2Q9C056 277 aaPredicted RBP14.81□□□□□ -0.04
SYNE3-203ENST00000554873 GSN-AS1Q9NRJ2 163 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 GLTPD2A6NH11 291 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 TLR4O00206 839 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 SNAPC5O75971 98 aa14.81□□□□□ -0.04
SYNE3-203ENST00000554873 HIST1H2AGP0C0S8 130 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms