RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 CCNJQ5T5M9 372 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 AGAP6Q5VW22 663 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 METTL2BQ6P1Q9 378 aaKnown RBP11.22□□□□□ -0.61
XRCC3-208ENST00000554811 GPR32P1Q8NGA4 272 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 OR10H4Q8NGA5 316 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 C9orf43Q8TAL5 461 aaPredicted RBP11.22□□□□□ -0.61
XRCC3-208ENST00000554811 ZG16BQ96DA0 208 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 DTD2Q96FN9 168 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 KCTD7Q96MP8 289 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 AGAP4Q96P64 663 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 SP140LQ9H930 580 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.22□□□□□ -0.61
XRCC3-208ENST00000554811 UCKL1Q9NWZ5 548 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 ISPDA4D126 451 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 PDE9AO76083 593 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 ARHGEF15O94989 841 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 GNSP15586 552 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 IRS1P35568 1242 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 PPM1AP35813 382 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 MVDP53602 400 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 MRPL28Q13084 256 aaKnown RBP11.22□□□□□ -0.61
XRCC3-208ENST00000554811 LTB4RQ15722 352 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 C2orf27AQ580R0 203 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 MPP7Q5T2T1 576 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 PIP5KL1Q5T9C9 394 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 ARL9Q6T311 187 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 KLBQ86Z14 1044 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 TIGD4Q8IY51 512 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 PCNPQ8WW12 178 aaKnown RBP11.22□□□□□ -0.61
XRCC3-208ENST00000554811 ITPKCQ96DU7 683 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 PAWRQ96IZ0 340 aaKnown RBP11.22□□□□□ -0.61
XRCC3-208ENST00000554811 KLHL31Q9H511 634 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 STOML2Q9UJZ1 356 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 MEIOCA2RUB1 952 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 AGAP14A8MT82 685 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 PGRMC2O15173 223 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 LCMT2O60294 686 aaKnown RBP11.21□□□□□ -0.61
XRCC3-208ENST00000554811 HPGDSO60760 199 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 HBQ1P09105 142 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 IL1RNP18510 177 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 FUT1P19526 365 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 CPN2P22792 545 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 MMP11P24347 488 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 ZSWIM7Q19AV6 140 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 C18orf63Q68DL7 685 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 FAM92BQ6ZTR7 304 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 PDZD3Q86UT5 571 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 TMC8Q8IU68 726 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 RAB42Q8N4Z0 105 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 OR4E2Q8NGC2 313 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 OR51L1Q8NGJ5 315 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 OR8J1Q8NGP2 316 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 OR52P1PQ8NH57 321 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 SMG7Q92540 1137 aaKnown RBP11.21□□□□□ -0.61
XRCC3-208ENST00000554811 POP5Q969H6 163 aaKnown RBP11.21□□□□□ -0.61
XRCC3-208ENST00000554811 SLC38A2Q96QD8 506 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 BTBD2Q9BX70 525 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 MAPRE3Q9UPY8 281 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 BRWD1Q9NSI6 2320 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 TRAV6A0A075B6T7 132 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 EIF3FO00303 357 aaPredicted RBP11.21□□□□□ -0.61
XRCC3-208ENST00000554811 HRO43593 1189 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 FKTNO75072 461 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 REM1O75628 298 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 CCL5P13501 91 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 ADRB3P13945 408 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 CERS1P27544 350 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 MC3RP41968 323 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 WDR5P61964 334 aaKnown RBP11.21□□□□□ -0.61
XRCC3-208ENST00000554811 SLC3A1Q07837 685 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 IRF3Q14653 427 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 ZC3H14Q6PJT7 736 aaKnown RBP11.21□□□□□ -0.61
XRCC3-208ENST00000554811 TECPR1Q7Z6L1 1165 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 ADGRD2Q7Z7M1 963 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 ANKRD53Q8N9V6 530 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 ADAMTS15Q8TE58 950 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 RGMAQ96B86 450 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 ZFP3Q96NJ6 502 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 RBCK1Q9BYM8 510 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 PLA2G12AQ9BZM1 189 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 DPP7Q9UHL4 492 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 SNX7Q9UNH6 387 aa11.21□□□□□ -0.61
XRCC3-208ENST00000554811 GBF1Q92538 1859 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 LOC102723532A0A0G2JNH3 316 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 TRIM64BA6NI03 449 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 ARHGEF9O43307 516 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 MPZL2O60487 215 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 SAGP10523 405 aaPredicted RBP11.21□□□□□ -0.62
XRCC3-208ENST00000554811 DDCP20711 480 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 CBLP22681 906 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 MYL9P24844 172 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 SLC39A5Q6ZMH5 540 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 NLRP8Q86W28 1048 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 ADGRF3Q8IZF5 1079 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 PIGKQ92643 395 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 SECISBP2Q96T21 854 aaKnown RBP11.21□□□□□ -0.62
XRCC3-208ENST00000554811 BARHL1Q9BZE3 327 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 MYNNQ9NPC7 610 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 SEC14L4Q9UDX3 406 aa11.21□□□□□ -0.62
XRCC3-208ENST00000554811 STUB1Q9UNE7 303 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms