RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 UBE2QL1A1L167 161 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 MBD3L3A6NE82 208 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 E7EVH7 732 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 AP3B1O00203 1094 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 PHF1O43189 567 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 CTIFO43310 598 aaKnown RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 H2AFYO75367 372 aaKnown RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 ERN1O75460 977 aaKnown RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 DNAJC8O75937 253 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 MBD3O95983 291 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 IFNA16P05015 189 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 PTMAP06454 111 aaKnown RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 RFPL3SP0C7P2 107 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 SMIM10L1P0DMW3 83 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 CCL3P10147 92 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 ENO3P13929 434 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 NPPBP16860 134 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 TNNI3P19429 210 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 MAKP20794 623 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 CCND1P24385 295 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 CTNNA1P35221 906 aaKnown RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 AHRP35869 848 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 FDFT1P37268 417 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 PIGAP37287 484 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 ANP32AP39687 249 aaKnown RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 GRIA1P42261 906 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 MAGEA1P43355 309 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 CPA2P48052 419 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 TRPC1P48995 793 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 NPY2RP49146 381 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 PTH2RP49190 550 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 PCYT1AP49585 367 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 WNT3P56703 355 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 RWDD2BP57060 319 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 SESN2P58004 480 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 RAB8AP61006 207 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 TNK1Q13470 666 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 NAE1Q13564 534 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF460Q14592 562 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 ELAVL1Q15717 326 aaKnown RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 MPEG1Q2M385 716 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 CHRFAM7AQ494W8 412 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 PIGGQ5H8A4 983 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 C11orf63Q6NUN7 778 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 AGTRAPQ6RW13 159 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 FAM111BQ6SJ93 734 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 LCTLQ6UWM7 567 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 PLEKHM3Q6ZWE6 761 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 UBE2R2Q712K3 238 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 CA13Q8N1Q1 262 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 PRELID2Q8N945 189 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 MORN4Q8NDC4 146 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 C7orf57Q8NEG2 295 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 MBD3L2Q8NHZ7 208 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 SLC35B2Q8TB61 432 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 GCDHQ92947 438 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 SMIM10Q96HG1 83 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 PDLIM2Q96JY6 352 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 TRIB1Q96RU8 372 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 CHP1Q99653 195 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 WDR83Q9BRX9 315 aaKnown RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 HAUS8Q9BT25 410 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 SFXN3Q9BWM7 321 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 NPLQ9BXD5 320 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 PIGMQ9H3S5 423 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 GOLPH3Q9H4A6 298 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 UBTD1Q9HAC8 227 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 SH2D2AQ9NP31 389 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 ADAP2Q9NPF8 381 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 PRTFDC1Q9NRG1 225 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 YAE1D1Q9NRH1 226 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 TREX1Q9NSU2 369 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF701Q9NV72 531 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 PARPBPQ9NWS1 579 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 TRMT1Q9NXH9 659 aaKnown RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF226Q9NYT6 803 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 CNIH4Q9P003 139 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 C6orf203Q9P0P8 240 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF148Q9UQR1 794 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 CRYL1Q9Y2S2 319 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 TNPO3Q9Y5L0 923 aaKnown RBP4.4□□□□□ -1.71
ATXN3-229ENST00000554672 CPAMD8Q8IZJ3 1885 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 VPS13CQ709C8 3753 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 A8MXE2 369 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 DEFB108AA8MXU0 73 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 KDM4EB2RXH2 506 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 EIF3FO00303 357 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 CD5LO43866 347 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF354AO60765 605 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 CTNSO60931 367 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 TRAPPC6AO75865 159 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 SOX30O94993 753 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 RCBTB2O95199 551 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 VAPBO95292 243 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 C1QAP02745 245 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 HPNP05981 417 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 TPM3P06753 285 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 SERPINA6P08185 405 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 ADH4P08319 380 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms