RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 PRAMEF4O60810 478 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 DNAJA2O60884 412 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 HSD3B1P14060 373 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 TCN1P20061 433 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-214ENST00000554604 MAOAP21397 527 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 HSD3B2P26439 372 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 MSX2P35548 267 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-214ENST00000554604 CASP2P42575 452 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 GTF2A1P52655 376 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-214ENST00000554604 PLA2G16P53816 162 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 BTG2P78543 158 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 HMGCS1Q01581 520 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 TGM3Q08188 693 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 CSTF3Q12996 717 aaKnown RBP11.61□□□□□ -0.55
SHMT2-214ENST00000554604 CHIT1Q13231 466 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 TIGD2Q4W5G0 525 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 SGO1Q5FBB7 561 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 PAGE3Q5JUK9 113 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 ACER2Q5QJU3 275 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 OGFRL1Q5TC84 451 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-214ENST00000554604 PRAMEF9Q5VWM5 478 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 FRG2Q64ET8 278 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 FCRLBQ6BAA4 426 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 GRHL2Q6ISB3 625 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 LCN8Q6JVE9 175 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 RPUSD3Q6P087 351 aaKnown RBP11.61□□□□□ -0.55
SHMT2-214ENST00000554604 SPATA24Q86W54 205 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 DHFR2Q86XF0 187 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 AQP12AQ8IXF9 295 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 CA13Q8N1Q1 262 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 LIX1Q8N485 282 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 SLC5A8Q8N695 610 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 BCORP1Q8N888 145 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 OR2L5Q8NG80 312 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 FAR1Q8WVX9 515 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 UBE2E3Q969T4 207 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 VPS33AQ96AX1 596 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 MS4A6EQ96DS6 147 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 METTL2AQ96IZ6 378 aaKnown RBP11.61□□□□□ -0.55
SHMT2-214ENST00000554604 FCRL1Q96LA6 429 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 FRG2BQ96QU4 278 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 BARD1Q99728 777 aaKnown RBP11.61□□□□□ -0.55
SHMT2-214ENST00000554604 DPY30Q9C005 99 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 KLHL4Q9C0H6 718 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 REXO4Q9GZR2 422 aaKnown RBP11.61□□□□□ -0.55
SHMT2-214ENST00000554604 PCDHAC1Q9H158 963 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 COPS7BQ9H9Q2 264 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-214ENST00000554604 MMP25Q9NPA2 562 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 PRDM9Q9NQV7 894 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 RIMS3Q9UJD0 308 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 MRPS33Q9Y291 106 aaKnown RBP11.61□□□□□ -0.55
SHMT2-214ENST00000554604 GTF3C1Q12789 2109 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 PCNX1Q96RV3 2341 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 H0YIV9 168 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 CLDN4O14493 209 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 SEMA7AO75326 666 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 IL6P05231 212 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 SLC7A1P30825 629 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 CLNS1AP54105 237 aaKnown RBP11.6□□□□□ -0.55
SHMT2-214ENST00000554604 CLDN8P56748 225 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 SLC26A5P58743 744 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 CAPRIN1Q14444 709 aaKnown RBP11.6□□□□□ -0.55
SHMT2-214ENST00000554604 TRIP10Q15642 601 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 INAQ16352 499 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 FXNQ16595 210 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 MEP1AQ16819 746 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 H3F3CQ6NXT2 135 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 IZUMO2Q6UXV1 221 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 BEST3Q8N1M1 668 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 ST6GALNAC3Q8NDV1 305 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 ADCY4Q8NFM4 1077 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 DNAJB8Q8NHS0 232 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 SSC4DQ8WTU2 575 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 WDR34Q96EX3 536 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 LRGUKQ96M69 825 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 NPLQ9BXD5 320 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-214ENST00000554604 AICDAQ9GZX7 198 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 IL1RL2Q9HB29 575 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 OLAHQ9NV23 265 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 ACTR3BQ9P1U1 418 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 CROCCQ5TZA2 2017 aa11.6□□□□□ -0.55
SHMT2-214ENST00000554604 TCRBV16S1A1N1A0A5B0 115 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 A8MUA0 341 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 PRAMEF2O60811 474 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 PCNAP12004 261 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 BCKDHAP12694 445 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 EDN3P14138 238 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 CD22P20273 847 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 PEX2P28328 305 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 HTR1EP28566 365 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 GSK3BP49841 420 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 HNRNPFP52597 415 aaKnown RBP11.59□□□□□ -0.55
SHMT2-214ENST00000554604 SLC13A2Q13183 592 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 RUNX2Q13950 521 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 ADPRMQ3LIE5 342 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 C10orf62Q5T681 223 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-214ENST00000554604 LPCAT4Q643R3 524 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 ADNP2Q6IQ32 1131 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 NANOGP8Q6NSW7 305 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 MED27Q6P2C8 311 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms