RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 ZDHHC11Q9H8X9 412 aa7.16□□□□□ -1.26
ABCD4-220ENST00000553998 LYARQ9NX58 379 aaKnown RBP7.16□□□□□ -1.26
ABCD4-220ENST00000553998 MS4A12Q9NXJ0 267 aa7.16□□□□□ -1.26
ABCD4-220ENST00000553998 VTI1BQ9UEU0 232 aa7.16□□□□□ -1.26
ABCD4-220ENST00000553998 PLEKHA6Q9Y2H5 1048 aa7.16□□□□□ -1.26
ABCD4-220ENST00000553998 CCL27Q9Y4X3 112 aa7.16□□□□□ -1.26
ABCD4-220ENST00000553998 SPACA6W5XKT8 324 aa7.16□□□□□ -1.26
ABCD4-220ENST00000553998 ANK3Q12955 4377 aaKnown RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 A0A0A6YYD5 115 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 A0A0G2JNJ9 132 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 A6NNC1 897 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 FAM171A2A8MVW0 826 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 KIAA1324LA8MWY0 1029 aaPredicted RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 PSMD12O00232 456 aaPredicted RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 SAP18O00422 153 aaKnown RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 RTCAO00442 366 aaKnown RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 PIP5K1BO14986 540 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 ATE1O95260 518 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 IGHG3P01860 377 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 GLI4P10075 376 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 RNH1P13489 461 aaKnown RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 ACVR2AP27037 513 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 CERS1P27544 350 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 KIR2DL3P43628 341 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 DGKQP52824 942 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 LIM2P55344 173 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 RAB38P57729 211 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 OR4D2P58180 307 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 TRA2BP62995 288 aaKnown RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 HMGCS1Q01581 520 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 ACSM2AQ08AH3 577 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 RUNX2Q13950 521 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 SMU1Q2TAY7 513 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 XKR7Q5GH72 579 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 MFSD4BQ5TF39 518 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 TMEM198Q66K66 360 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 ACSM2BQ68CK6 577 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 RTL6Q6ICC9 239 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 MRM1Q6IN84 353 aaKnown RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 PAMR1Q6UXH9 720 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 ZNF793Q6ZN11 406 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 Q6ZSR9 355 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 COMMD6Q7Z4G1 85 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 KRTAP1-3Q8IUG1 177 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 LIX1LQ8IVB5 337 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 DDIASQ8IXT1 998 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 ZZZ3Q8IYH5 903 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 CA13Q8N1Q1 262 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 KIF2BQ8N4N8 673 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 TSLPQ969D9 159 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 TBC1D20Q96BZ9 403 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 C11orf24Q96F05 449 aaPredicted RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 PPP3R2Q96LZ3 170 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 HBEGFQ99075 208 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 GPATCH1Q9BRR8 931 aaKnown RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 MRPL1Q9BYD6 325 aaKnown RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 TUBB1Q9H4B7 451 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 CCDC134Q9H6E4 229 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 ZNF395Q9H8N7 513 aaPredicted RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 PRDM9Q9NQV7 894 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 HCN3Q9P1Z3 774 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 Q9UFV3 132 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 PHF11Q9UIL8 331 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 MCM8Q9UJA3 840 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 DAPP1Q9UN19 280 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 MRPS33Q9Y291 106 aaKnown RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 WBP11Q9Y2W2 641 aaKnown RBP7.15□□□□□ -1.26
ABCD4-220ENST00000553998 TMED5Q9Y3A6 229 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 MMACHCQ9Y4U1 282 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 FAM215AQ9Y5M1 114 aa7.15□□□□□ -1.26
ABCD4-220ENST00000553998 HRNRQ86YZ3 2850 aaPredicted RBP7.14□□□□□ -1.27
ABCD4-220ENST00000553998 A0A0G2JN53 185 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 ZNF860A6NHJ4 632 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 SAGE2PA6NJ88 616 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 TRPC5OSA6NMA1 111 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 TMEM233B4DJY2 109 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 CYR61O00622 381 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 CLDN4O14493 209 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 FCHO1O14526 889 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 BCKDKO14874 412 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 HDAC3O15379 428 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 TMPRSS11DO60235 418 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 CDC40O60508 579 aaKnown RBP eCLIP7.14□□□□□ -1.27
ABCD4-220ENST00000553998 SH3BGRLO75368 114 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 EEDO75530 441 aaKnown RBP7.14□□□□□ -1.27
ABCD4-220ENST00000553998 MYO1DO94832 1006 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 GLSO94925 669 aaPredicted RBP7.14□□□□□ -1.27
ABCD4-220ENST00000553998 B3GALT4O96024 378 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 RAF1P04049 648 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 KLK1P06870 262 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 FHP07954 510 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 FAM58BPP0C7Q3 252 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 LINC00032P0C843 101 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 PCSK2P16519 638 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 TLX1P31314 330 aaPredicted RBP7.14□□□□□ -1.27
ABCD4-220ENST00000553998 TIA1P31483 386 aaKnown RBP eCLIP7.14□□□□□ -1.27
ABCD4-220ENST00000553998 BUD31P41223 144 aaPredicted RBP7.14□□□□□ -1.27
ABCD4-220ENST00000553998 NR0B1P51843 470 aaKnown RBP7.14□□□□□ -1.27
ABCD4-220ENST00000553998 MAPK12P53778 367 aa7.14□□□□□ -1.27
ABCD4-220ENST00000553998 SLAMF1Q13291 335 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms