RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 COG4Q9H9E3 785 aa2□□□□□ -2.09
SRP54-204ENST00000553923 CALHM2Q9HA72 323 aa2□□□□□ -2.09
SRP54-204ENST00000553923 FANCEQ9HB96 536 aa2□□□□□ -2.09
SRP54-204ENST00000553923 ZBTB20Q9HC78 741 aaPredicted RBP2□□□□□ -2.09
SRP54-204ENST00000553923 AGPAT5Q9NUQ2 364 aa2□□□□□ -2.09
SRP54-204ENST00000553923 SLC38A7Q9NVC3 462 aa2□□□□□ -2.09
SRP54-204ENST00000553923 PLEK2Q9NYT0 353 aa2□□□□□ -2.09
SRP54-204ENST00000553923 P2RX2Q9UBL9 471 aa2□□□□□ -2.09
SRP54-204ENST00000553923 SEC14L3Q9UDX4 400 aa2□□□□□ -2.09
SRP54-204ENST00000553923 FOXJ3Q9UPW0 622 aa2□□□□□ -2.09
SRP54-204ENST00000553923 MAB21L2Q9Y586 359 aa2□□□□□ -2.09
SRP54-204ENST00000553923 AP4B1Q9Y6B7 739 aa2□□□□□ -2.09
SRP54-204ENST00000553923 R4GN57 208 aa2□□□□□ -2.09
SRP54-204ENST00000553923 ZNF646O15015 1829 aaPredicted RBP2□□□□□ -2.09
SRP54-204ENST00000553923 PTCH1Q13635 1447 aa2□□□□□ -2.09
SRP54-204ENST00000553923 KIF7Q2M1P5 1343 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 A0A0G2JNG1 304 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 GOLGA6L7A0A1B0GV03 622 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 E9PI62 339 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 NPIPA2E9PIF3 369 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 SDHDO14521 159 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 DNALI1O14645 258 aaPredicted RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 FPGTO14772 594 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 CFLARO15519 480 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 LRRTM2O43300 516 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 DFNA5O60443 496 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 BCAS1O75363 584 aaPredicted RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 WISP2O76076 250 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 PAHP00439 452 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 AGTP01019 485 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 EPOP01588 193 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 RAF1P04049 648 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 TFAP2AP05549 437 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 LYNP07948 512 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 POLR2MP0CAP2 368 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 STAG3L3P0CL85 134 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 PNMTP11086 282 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 RALBP11234 206 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 ANPEPP15144 967 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 ZNF44P15621 663 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 TPSB2P20231 275 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 MSH3P20585 1137 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 DPP4P27487 766 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 NMT1P30419 496 aaKnown RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 AXLP30530 894 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 CSTF2P33240 577 aaKnown RBP eCLIP1.99□□□□□ -2.09
SRP54-204ENST00000553923 DUTP33316 252 aaKnown RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 RFC4P35249 363 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 CAPGP40121 348 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 MAGEA1P43355 309 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 MAGEA11P43364 429 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 OR3A3P47888 321 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 NPY2RP49146 381 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 FNTAP49354 379 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 CEBPDP49716 269 aaPredicted RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 PRMT2P55345 433 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 CLDN15P56746 228 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 CLDN17P56750 224 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 CARD18P57730 90 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 SRYQ05066 204 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 NCBP1Q09161 790 aaKnown RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 FUT7Q11130 342 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 TAF10Q12962 218 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 DNAJC3Q13217 504 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 DOC2AQ14183 400 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 SELPLGQ14242 412 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 KIR2DS5Q14953 304 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 TPSAB1Q15661 275 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 SSX2Q16385 188 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 MAPK6Q16659 721 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 CLPPQ16740 277 aaPredicted RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 ANKRD55Q3KP44 614 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 ITPRIPL2Q3MIP1 535 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 LRRC37A5PQ49AS3 106 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 BCL7AQ4VC05 210 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 SPDYCQ5MJ68 293 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 C10orf120Q5SQS8 335 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 C20orf194Q5TEA3 1177 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 AADACL4Q5VUY2 407 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 CDC42EP5Q6NZY7 148 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 SLC27A4Q6P1M0 643 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 NIPAL3Q6P499 406 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 LRRC8BQ6P9F7 803 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 METAP1DQ6UB28 335 aaPredicted RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 CWC27Q6UX04 472 aaKnown RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 PACS1Q6VY07 963 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 ZNF841Q6ZN19 808 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 SH2D5Q6ZV89 423 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 CENPUQ71F23 418 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 TRMT11Q7Z4G4 463 aaKnown RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 P4HA3Q7Z4N8 544 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 CPEB2Q7Z5Q1 589 aaKnown RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 C5orf24Q7Z6I8 188 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 TMCO2Q7Z6W1 182 aaPredicted RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 KIAA1328Q86T90 577 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 PRUNE1Q86TP1 453 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 OFCC1Q8IZS5 231 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 SLC43A2Q8N370 569 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 PRSS35Q8N3Z0 413 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 NIPA2Q8N8Q9 360 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms