RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SOX3P41225 446 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 FRKP42685 505 aaPredicted RBP10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 NCBP2P52298 156 aaKnown RBP eCLIP10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 MLLT10P55197 1068 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 MRPS35P82673 323 aaKnown RBP10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 EXOSC7Q15024 291 aaKnown RBP10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 INPP5JQ15735 1006 aaPredicted RBP10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 PRSS53Q2L4Q9 553 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 PRR30Q53SZ7 412 aaPredicted RBP10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 ZNF385BQ569K4 471 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 PIGGQ5H8A4 983 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 IL23RQ5VWK5 629 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 FAM111BQ6SJ93 734 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 OPN5Q6U736 354 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 FAM180AQ6UWF9 173 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 C16orf47Q6ZP98 133 aaPredicted RBP10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 ZNF227Q86WZ6 799 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 CCDC116Q8IYX3 515 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 ZFP28Q8NHY6 868 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 PIWIL2Q8TC59 973 aaKnown RBP10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 TP53INP1Q96A56 240 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 TMEM125Q96AQ2 219 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 MIB2Q96AX9 1013 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 ZBED6CLQ96FA7 236 aaPredicted RBP10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 AMDHD1Q96NU7 426 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 BARD1Q99728 777 aaKnown RBP10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 TRIM4Q9C037 500 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 LIN28AQ9H9Z2 209 aaKnown RBP10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 MED4Q9NPJ6 270 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 ACSS1Q9NUB1 689 aaPredicted RBP10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 HPF1Q9NWY4 346 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 PRODH2Q9UF12 536 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 ATP6V1HQ9UI12 483 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 MAPRE3Q9UPY8 281 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 NINQ8N4C6 2090 aa10.84□□□□□ -0.67
TRAFD1-209ENST00000552896 A0A087WV62 115 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 PLOD2O00469 737 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 COQ9O75208 318 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 OR6B1O95007 311 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 SP1P08047 785 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 KITP10721 976 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 G6PDP11413 515 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 LBPP18428 481 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 TMED10P49755 219 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 PSPHP78330 225 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 FOXK1P85037 733 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 DUSP8Q13202 625 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 TRMT12Q53H54 448 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 FHL5Q5TD97 284 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 HLA-DQA1Q5Y7H0 255 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 SPINK14Q6IE38 97 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 ANKRD26P1Q6NSI1 321 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 RTL4Q6ZR62 310 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 RGS9BPQ6ZS82 235 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 LARP4Q71RC2 724 aaKnown RBP eCLIP10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 CAMKMTQ7Z624 323 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 WDR75Q8IWA0 830 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 RIMKLAQ8IXN7 391 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 TAGAPQ8N103 731 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 OR2L13Q8N349 312 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 GOLM1Q8NBJ4 401 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 OR7G2Q8NG99 324 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 OR52R1Q8NGF1 315 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 KAT2AQ92830 837 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 ADIPOR1Q96A54 375 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 CIDECQ96AQ7 238 aaPredicted RBP10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 SNRNP40Q96DI7 357 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 SPACA9Q96E40 222 aaPredicted RBP10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 MAELQ96JY0 434 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 MAGEB18Q96M61 343 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 ITPAQ9BY32 194 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 GLIPR2Q9H4G4 154 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 ATAD3AQ9NVI7 634 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 BCAP29Q9UHQ4 241 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 ERVK-11Q9UQG0 969 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 DTX4Q9Y2E6 619 aa10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 KLF13Q9Y2Y9 288 aaPredicted RBP10.83□□□□□ -0.68
TRAFD1-209ENST00000552896 FREM3P0C091 2139 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 J3QKU1 62 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 ACOX3O15254 700 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 ATP8B1O43520 1251 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 ZNF354AO60765 605 aaPredicted RBP10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 RASAL1O95294 804 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 PSMG1O95456 288 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 FBXO45P0C2W1 286 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 EPHA3P29320 983 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 MC3RP41968 323 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 EMDP50402 254 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 ST13P50502 369 aaKnown RBP10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 CLDN8P56748 225 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 NRG3P56975 720 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 DCAF7P61962 342 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 HSPB3Q12988 150 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 MLC1Q15049 377 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 ZNF791Q3KP31 576 aaPredicted RBP10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 HSP90B2PQ58FF3 399 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 SLC25A25Q6KCM7 469 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 TMEM107Q6UX40 140 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 LYPD8Q6UX82 237 aa10.82□□□□□ -0.68
TRAFD1-209ENST00000552896 MAVSQ7Z434 540 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms