RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 ABCD3P28288 659 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 SLCO1A2P46721 670 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 PPP2R2BQ00005 443 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 FUT7Q11130 342 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 ZKSCAN8Q15776 578 aaPredicted RBP12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 KBTBD12Q3ZCT8 623 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 MRM1Q6IN84 353 aaKnown RBP12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 SLC30A6Q6NXT4 461 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 PRSS57Q6UWY2 283 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 PRIMA1Q86XR5 153 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 KLHL7Q8IXQ5 586 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 PRR22Q8IZ63 422 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 ZNF615Q8N8J6 731 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 LRRN4CLQ8ND94 238 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 OR7G1Q8NGA0 311 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 OR14L1PQ8NHC6 308 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 UCN3Q969E3 161 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 ADIPOR1Q96A54 375 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 INTS12Q96CB8 462 aaKnown RBP12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 DTNBP1Q96EV8 351 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 Q96MF0 132 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 MDFIQ99750 246 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 CPNE1Q99829 537 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 DDX31Q9H8H2 851 aaKnown RBP12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 ACTR8Q9H981 624 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 NMRAL1Q9HBL8 299 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 SMYD2Q9NRG4 433 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 PACSIN3Q9UKS6 424 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 TESMINQ9Y4I5 508 aa12.92□□□□□ -0.34
CHMP1A-210ENST00000551981 MED12Q93074 2177 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 MED12LQ86YW9 2145 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 SNPHO15079 494 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 TMPRSS11DO60235 418 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 KERAO60938 352 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 PPM1BO75688 479 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 ABCB1P08183 1280 aaPredicted RBP12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 RHOXF2BP0C7M4 288 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 FPR1P21462 350 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 CHMP24386 653 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 BSGP35613 385 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 CPOXP36551 454 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 SRYQ05066 204 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 SNTA1Q13424 505 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 CUL3Q13618 768 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 LIPJQ5W064 366 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 TMEM81Q6P7N7 255 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 RAPH1Q70E73 1250 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 NUP54Q7Z3B4 507 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 YTHDF3Q7Z739 585 aaKnown RBP12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 TBC1D1Q86TI0 1168 aaPredicted RBP12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 TEX9Q8N6V9 391 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 PYROXD1Q8WU10 500 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 SLC44A1Q8WWI5 657 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 UCN2Q96RP3 112 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 CCL19Q99731 98 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 OSBPL11Q9BXB4 747 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 ZNF717Q9BY31 904 aaPredicted RBP12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 TRIM31Q9BZY9 425 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 KLRF1Q9NZS2 232 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 CFL2Q9Y281 166 aa12.91□□□□□ -0.34
CHMP1A-210ENST00000551981 SYCE1LA8MT33 242 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 A8MXE2 369 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 CXorf49A8MYA2 514 aaPredicted RBP12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 H0YIV9 168 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 UBXN8O00124 270 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 SMAD7O15105 426 aaKnown RBP12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 CBR3O75828 277 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 TCP1P17987 556 aaKnown RBP12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 NT5EP21589 574 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 GPX3P22352 226 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 SPRP35270 261 aaPredicted RBP12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 SOX18P35713 384 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 GP5P40197 560 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 AAGABQ6PD74 315 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 ADGRE4PQ86SQ3 457 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 ISCA2Q86U28 154 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 IFNEQ86WN2 208 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 GCNT2Q8N0V5 402 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 CIARTQ8N365 385 aaPredicted RBP12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 OR4K14Q8NGD5 310 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 REPIN1Q9BWE0 567 aaKnown RBP12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 OR2B2Q9GZK3 357 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 SERHLQ9NQF3 203 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 PSD3Q9NYI0 1048 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 ZNF226Q9NYT6 803 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 MAPRE3Q9UPY8 281 aa12.9□□□□□ -0.34
CHMP1A-210ENST00000551981 STAB1Q9NY15 2570 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 EFCAB8A8MWE9 144 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 MSTNO14793 375 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 PGRMC2O15173 223 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 ACOX3O15254 700 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 CTIFO43310 598 aaKnown RBP12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 UGDHO60701 494 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 ICOSLGO75144 302 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 CT62P0C5K7 136 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 CPMP14384 443 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 CRABP2P29373 138 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 SSTR1P30872 391 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 PCYT1AP49585 367 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 XKP51811 444 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms