RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 NAT9Q9BTE0 207 aa13.83□□□□□ -0.2
CACNB3-220ENST00000551716 MS4A8Q9BY19 250 aa13.83□□□□□ -0.2
CACNB3-220ENST00000551716 KLHL4Q9C0H6 718 aa13.83□□□□□ -0.2
CACNB3-220ENST00000551716 SERHLQ9NQF3 203 aa13.83□□□□□ -0.2
CACNB3-220ENST00000551716 IKZF3Q9UKT9 509 aa13.83□□□□□ -0.2
CACNB3-220ENST00000551716 MRPS18CQ9Y3D5 142 aaKnown RBP13.83□□□□□ -0.2
CACNB3-220ENST00000551716 CAPN6Q9Y6Q1 641 aa13.83□□□□□ -0.2
CACNB3-220ENST00000551716 RTCAO00442 366 aaKnown RBP13.82□□□□□ -0.2
CACNB3-220ENST00000551716 WIPF1O43516 503 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 KRT14P02533 472 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 FGGP02679 453 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 CLPSP04118 112 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 ZNF37AP17032 561 aaPredicted RBP13.82□□□□□ -0.2
CACNB3-220ENST00000551716 ABCD3P28288 659 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 GGT5P36269 586 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 CASP2P42575 452 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 KIR2DL2P43627 348 aaPredicted RBP13.82□□□□□ -0.2
CACNB3-220ENST00000551716 STARP49675 285 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 CLDN18P56856 261 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 TNFRSF17Q02223 184 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 DOC2AQ14183 400 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 TBCCQ15814 346 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 SPANXN3Q5MJ09 141 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 ADNP2Q6IQ32 1131 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 PLXDC2Q6UX71 529 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 ADIPOR1Q96A54 375 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 SFXN2Q96NB2 322 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 TMEM204Q9BSN7 226 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 LRTM1Q9HBL6 345 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 BARX1Q9HBU1 254 aaPredicted RBP13.82□□□□□ -0.2
CACNB3-220ENST00000551716 CTNNAL1Q9UBT7 734 aa13.82□□□□□ -0.2
CACNB3-220ENST00000551716 RAI1Q7Z5J4 1906 aaPredicted RBP13.82□□□□□ -0.2
CACNB3-220ENST00000551716 NPEPPSL1A6NEC2 478 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 PPM1BO75688 479 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 CGAP01215 116 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 SRD5A2P31213 254 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 ARFIP1P53367 373 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 CDKL4Q5MAI5 379 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 KHDRBS2Q5VWX1 349 aaKnown RBP13.81□□□□□ -0.2
CACNB3-220ENST00000551716 ANKRD34AQ69YU3 496 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 ADAM5Q6NVV9 412 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 ZCCHC7Q8N3Z6 543 aaKnown RBP13.81□□□□□ -0.2
CACNB3-220ENST00000551716 ZNF610Q8N9Z0 462 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 OR7G1Q8NGA0 311 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 DOK4Q8TEW6 326 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 ZNF473Q8WTR7 871 aaKnown RBP13.81□□□□□ -0.2
CACNB3-220ENST00000551716 AKAP1Q92667 903 aaKnown RBP eCLIP13.81□□□□□ -0.2
CACNB3-220ENST00000551716 RGMAQ96B86 450 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 KCNK17Q96T54 332 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 OSBPL11Q9BXB4 747 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 OR10A5Q9H207 317 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 SLCO5A1Q9H2Y9 848 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 WDR41Q9HAD4 459 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 CXorf21Q9HAI6 301 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 PPANQ9NQ55 473 aaKnown RBP13.81□□□□□ -0.2
CACNB3-220ENST00000551716 KLRF1Q9NZS2 232 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 PROCRQ9UNN8 238 aa13.81□□□□□ -0.2
CACNB3-220ENST00000551716 STK16O75716 305 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 TGFB1P01137 390 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 ALDOAP04075 364 aaKnown RBP13.8□□□□□ -0.2
CACNB3-220ENST00000551716 THBDP07204 575 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 PEPDP12955 493 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 SSTR4P31391 388 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 RAP1GDS1P52306 607 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 PGGT1BP53609 377 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 IRF8Q02556 426 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 PDK4Q16654 411 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 C18orf21Q32NC0 220 aaPredicted RBP13.8□□□□□ -0.2
CACNB3-220ENST00000551716 C6orf52Q5T4I8 152 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 DEPDC1Q5TB30 811 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 C6orf163Q5TEZ5 329 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 C18orf63Q68DL7 685 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 C22orf34Q6ZV56 151 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 PLCZ1Q86YW0 608 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 AGGF1Q8N302 714 aaeCLIP13.8□□□□□ -0.2
CACNB3-220ENST00000551716 ZNF615Q8N8J6 731 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 SNX31Q8N9S9 440 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 WDSUB1Q8N9V3 476 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 RDH11Q8TC12 318 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 PLPPR2Q96GM1 343 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 CFL2Q9Y281 166 aa13.8□□□□□ -0.2
CACNB3-220ENST00000551716 MED12LQ86YW9 2145 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.79□□□□□ -0.2
CACNB3-220ENST00000551716 TNFRSF21O75509 655 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 PLAUP00749 431 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 FESP07332 822 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 ACVR1BP36896 505 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 SIRPAP78324 504 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 TGFBIQ15582 683 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 TSNQ15631 228 aaKnown RBP13.79□□□□□ -0.2
CACNB3-220ENST00000551716 TEDDM1Q5T9Z0 273 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 SULT1C3Q6IMI6 304 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 MED27Q6P2C8 311 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 DNM1P46Q6ZS02 220 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 GALNT12Q8IXK2 581 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 PRR22Q8IZ63 422 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 GBP7Q8N8V2 638 aaPredicted RBP13.79□□□□□ -0.2
CACNB3-220ENST00000551716 CERS2Q96G23 380 aa13.79□□□□□ -0.2
CACNB3-220ENST00000551716 BAG1Q99933 345 aaPredicted RBP13.79□□□□□ -0.2
CACNB3-220ENST00000551716 RHNO1Q9BSD3 238 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms