RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	PCDHGA6	Q9Y5G7	932 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	DSPP	Q9NZW4	1301 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338		A0A0G2JPF8	293 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	HNRNPCL2	B2RXH8	293 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	HNRNPCL3	B7ZW38	293 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	FGF17	O60258	216 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	NME6	O75414	186 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	WBP4	O75554	376 aa	Known RBP	10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	SERPINB7	O75635	380 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZIC2	O95409	532 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	CTSB	P07858	339 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	HNRNPCL4	P0DMR1	293 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	ACP2	P11117	423 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	CPM	P14384	443 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	BCKDHB	P21953	392 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	CDH3	P22223	829 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	ELAVL4	P26378	380 aa	Known RBP	10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	DCK	P27707	260 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	PCSK6	P29122	969 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	TTK	P33981	857 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	XK	P51811	444 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	RAB38	P57729	211 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	VSX2	P58304	361 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	RACK1	P63244	317 aa	Known RBP	10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	ELOC	Q15369	112 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	GPAT3	Q53EU6	434 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZNF628	Q5EBL2	1059 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	COLEC12	Q5KU26	742 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	C6orf132	Q5T0Z8	1188 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	FHL5	Q5TD97	284 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	ARMC6	Q6NXE6	501 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	CDC73	Q6P1J9	531 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	HMGN2P46	Q86SG4	172 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	TSPYL5	Q86VY4	417 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	C17orf82	Q86X59	251 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	GKN2	Q86XP6	184 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	KRT73	Q86Y46	540 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	ENTHD1	Q8IYW4	607 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	ALDH16A1	Q8IZ83	802 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	SAMD14	Q8IZD0	417 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	GJD3	Q8N144	294 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	AVL9	Q8NBF6	648 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	BPIFB6	Q8NFQ5	453 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	CADM4	Q8NFZ8	388 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	OR5T3	Q8NGG3	340 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	OR13F1	Q8NGS4	319 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	LMX1A	Q8TE12	382 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	ISOC1	Q96CN7	298 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	CDX2	Q99626	313 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	BTBD2	Q9BX70	525 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	SLC38A1	Q9H2H9	487 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	UCK1	Q9HA47	277 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	NMNAT1	Q9HAN9	279 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	FANCE	Q9HB96	536 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	GIN1	Q9NXP7	522 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	FTSJ1	Q9UET6	329 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	FBXL21	Q9UKT6	434 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	A4GNT	Q9UNA3	340 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	CDC14A	Q9UNH5	594 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	RNF6	Q9Y252	685 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	HCN4	Q9Y3Q4	1203 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	SPAG17	Q6Q759	2223 aa		10.8	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZNF701	M0R085	212 aa	Predicted RBP	10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	TLR4	O00206	839 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	CYR61	O00622	381 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	PCDHGA12	O60330	932 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	SEC14L2	O76054	403 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	OXSR1	O95747	527 aa	Predicted RBP	10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	LGI1	O95970	557 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	PROS1	P07225	676 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	H1F0	P07305	194 aa	Known RBP	10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	ITIH1	P19827	911 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	PCMT1	P22061	227 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	TLX1	P31314	330 aa	Predicted RBP	10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	KRT20	P35900	424 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	GABRA4	P48169	554 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	NXPH1	P58417	271 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	SLC35A2	P78381	396 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	ID2	Q02363	134 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	RPL6	Q02878	288 aa	Known RBP	10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	GNA13	Q14344	377 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	SEC23B	Q15437	767 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	NPTX1	Q15818	432 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	PRTG	Q2VWP7	1150 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	GTF2IRD2B	Q6EKJ0	949 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	HEPHL1	Q6MZM0	1159 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	WDR53	Q7Z5U6	358 aa	Predicted RBP	10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	GTF2IRD2	Q86UP8	949 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	TAGAP	Q8N103	731 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	SIX5	Q8N196	739 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	OR2L13	Q8N349	312 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	PARP8	Q8N3A8	854 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	SPEM1	Q8N4L4	309 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	DNAJC22	Q8N4W6	341 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	AQP11	Q8NBQ7	271 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	SIMC1	Q8NDZ2	872 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	C1orf216	Q8TAB5	229 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	PHF10	Q8WUB8	498 aa	Known RBP	10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	UBE2F	Q969M7	185 aa		10.79	□□□□□ -0.68
RAB5C-208	ENST00000551338	MUL1	Q969V5	352 aa		10.79	□□□□□ -0.68

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