RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 VWA5B2Q8N398 1253 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 OR5M9Q8NGP3 310 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 OR5M3Q8NGP4 307 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 OR2W6PQ8NHA6 318 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.96□□□□□ -0.49
NPAS3-209ENST00000551008 SPPL2AQ8TCT8 520 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 C16orf78Q8WTQ4 265 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 UBLCP1Q8WVY7 318 aaPredicted RBP11.96□□□□□ -0.49
NPAS3-209ENST00000551008 KLHL29Q96CT2 875 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 TRIM44Q96DX7 344 aaPredicted RBP11.96□□□□□ -0.49
NPAS3-209ENST00000551008 SMC6Q96SB8 1091 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 ITPAQ9BY32 194 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 TRIM8Q9BZR9 551 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 SLC6A15Q9H2J7 730 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 SIRT5Q9NXA8 310 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 DCDC2Q9UHG0 476 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 DLGAP4Q9Y2H0 992 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 NPFFR2Q9Y5X5 522 aa11.96□□□□□ -0.49
NPAS3-209ENST00000551008 AQP7O14520 342 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 ULK1O75385 1050 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 ERAL1O75616 437 aaKnown RBP11.95□□□□□ -0.5
NPAS3-209ENST00000551008 MYL2P10916 166 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 ABCD3P28288 659 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 SERPINB3P29508 390 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 TIA1P31483 386 aaKnown RBP eCLIP11.95□□□□□ -0.5
NPAS3-209ENST00000551008 PTGDSP41222 190 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 EMDP50402 254 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 SMSP52788 366 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 NAGLUP54802 743 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 NUP107P57740 925 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 DNAJB13P59910 316 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 VSNL1P62760 191 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 MRPS35P82673 323 aaKnown RBP11.95□□□□□ -0.5
NPAS3-209ENST00000551008 TFF3Q07654 80 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 RPS6KA2Q15349 733 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 CEBPEQ15744 281 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 GXYLT1Q4G148 440 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 ZNF628Q5EBL2 1059 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 MCEMP1Q8IX19 187 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 DND1Q8IYX4 353 aaKnown RBP11.95□□□□□ -0.5
NPAS3-209ENST00000551008 C4orf33Q8N1A6 199 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 CCNYL1Q8N7R7 359 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 GBP7Q8N8V2 638 aaPredicted RBP11.95□□□□□ -0.5
NPAS3-209ENST00000551008 C17orf47Q8NEP4 570 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 OR7G1Q8NGA0 311 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 ZNF675Q8TD23 568 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 HGDQ93099 445 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 SDCCAG3Q96C92 435 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 TREX2Q9BQ50 279 aaPredicted RBP11.95□□□□□ -0.5
NPAS3-209ENST00000551008 EBPLQ9BY08 206 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 BRINP2Q9C0B6 783 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 TP63Q9H3D4 680 aaPredicted RBP11.95□□□□□ -0.5
NPAS3-209ENST00000551008 MID1IP1Q9NPA3 183 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 ZFP64Q9NPA5 681 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 CNIH4Q9P003 139 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 RNF6Q9Y252 685 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 PLLPQ9Y342 182 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 PTGDR2Q9Y5Y4 395 aa11.95□□□□□ -0.5
NPAS3-209ENST00000551008 ANKRD33BA6NCL7 494 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 OR14I1A6ND48 311 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 KDM4EB2RXH2 506 aaPredicted RBP11.94□□□□□ -0.5
NPAS3-209ENST00000551008 B4DXG7 233 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 SUSD5O60279 629 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 GUCY1B2O75343 617 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 ABCB1P08183 1280 aaPredicted RBP11.94□□□□□ -0.5
NPAS3-209ENST00000551008 SNRPB2P08579 225 aaKnown RBP11.94□□□□□ -0.5
NPAS3-209ENST00000551008 CSNK2A2P19784 350 aaPredicted RBP11.94□□□□□ -0.5
NPAS3-209ENST00000551008 ALDH9A1P49189 494 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 KCNJ2P63252 427 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 PCLAFQ15004 111 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 CCDC71Q8IV32 467 aaPredicted RBP11.94□□□□□ -0.5
NPAS3-209ENST00000551008 RILPQ96NA2 401 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 NODALQ96S42 347 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 ANGPTL4Q9BY76 406 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 UBQLN3Q9H347 655 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 NPDC1Q9NQX5 325 aaPredicted RBP11.94□□□□□ -0.5
NPAS3-209ENST00000551008 OXSMQ9NWU1 459 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 UTS2RQ9UKP6 389 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 CCDC168Q8NDH2 2452 aa11.94□□□□□ -0.5
NPAS3-209ENST00000551008 AKAP9Q99996 3911 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 MED12LQ86YW9 2145 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 NUP214P35658 2090 aaPredicted RBP11.93□□□□□ -0.5
NPAS3-209ENST00000551008 GOLGA6L10A6NI86 522 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 DRD2P14416 443 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 IGFBP2P18065 325 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 KRT15P19012 456 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 KRT4P19013 534 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 ADH7P40394 386 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 CASP3P42574 277 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 BTKQ06187 659 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 ACSM2AQ08AH3 577 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 SLC10A1Q14973 349 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 KIAA0040Q15053 153 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 SPIN4Q56A73 249 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 ACSM2BQ68CK6 577 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 FAM71E1Q6IPT2 247 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 NPSR1Q6W5P4 371 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 SEM1Q6ZVN7 128 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 TRIM46Q7Z4K8 759 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 CCDC116Q8IYX3 515 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms