RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 MAELQ96JY0 434 aaKnown RBP11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 UGT3A2Q3SY77 523 aa11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 SFT2D3Q587I9 215 aa11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 C22orf42Q6IC83 251 aa11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 RNF215Q9Y6U7 377 aa11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 C5AR1P21730 350 aa11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 ADH6P28332 368 aa11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 SOX2P48431 317 aa11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 RPS26P62854 115 aaKnown RBP11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 TRAPPC6BQ86SZ2 158 aa11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 CHPT1Q8WUD6 406 aa11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 CCDC106Q9BWC9 280 aa11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 ZNF175Q9Y473 711 aa11.94□□□□□ -0.5
RAB3IP-212ENST00000550536 FAM227AF5H4B4 570 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 HTR1EP28566 365 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 CDKN2DP55273 166 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 MELKQ14680 651 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 TBRG1Q3YBR2 411 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 SIGLEC10Q96LC7 697 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 EIF5A2Q9GZV4 153 aaKnown RBP11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 ATPIF1Q9UII2 106 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 SNAP29O95721 258 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 SNAI1O95863 264 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 SYPP08247 313 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 MAP2K4P45985 399 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 NSUN5Q96P11 429 aaKnown RBP11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 HOXD1Q9GZZ0 328 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 FZD3Q9NPG1 666 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 ATXN7L3Q14CW9 347 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 C6orf120Q7Z4R8 191 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 PIAS4Q8N2W9 510 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 ASB15Q8WXK1 588 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 DPH7Q9BTV6 452 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 PCDHGA6Q9Y5G7 932 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 J3QRK9 145 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 P04436 131 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 ZNF182P17025 639 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 HNRNPKP61978 463 aaKnown RBP eCLIP11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 FBXL8Q96CD0 374 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 SGIP1Q9BQI5 828 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 TMEM185BQ9H7F4 350 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 APOBEC3BQ9UH17 382 aaKnown RBP11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 MAFKO60675 156 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 ZNF14P17017 642 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 RPS3P23396 243 aaKnown RBP eCLIP11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 RPS15P62841 145 aaKnown RBP11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 TCEAL1Q15170 157 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 BLOC1S3Q6QNY0 202 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 SPTSSAQ969W0 71 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 CARD8Q9Y2G2 431 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 GPR32O75388 356 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 RFPL1O75677 317 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 NPRL3Q12980 569 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 GPR137CQ8N3F9 429 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 BMFQ96LC9 184 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 BEX2Q9BXY8 128 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 BEX1Q9HBH7 125 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 TYROBPO43914 113 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 KCNJ13O60928 360 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 PAK4O96013 591 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 AGTR1P30556 359 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 MAGEA3P43357 314 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 AWAT2Q6E213 333 aa11.93□□□□□ -0.5
RAB3IP-212ENST00000550536 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 HBQ1P09105 142 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 FNTBP49356 437 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 DIO3P55073 304 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 ACTBP60709 375 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 ACTG1P63261 375 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 CTC1Q2NKJ3 1217 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 FAM43BQ6ZT52 329 aaPredicted RBP11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 TEX26Q8N6G2 289 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 SLC2A13Q96QE2 648 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 GRPRP30550 384 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 GGT2P36268 569 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 NNATQ16517 81 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 FAM69BQ5VUD6 431 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 UMODL1-AS1Q8N2C9 162 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 IL17RCQ8NAC3 791 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 OR51A7Q8NH64 312 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 TBC1D15Q8TC07 691 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 COL2A1P02458 1487 aaPredicted RBP11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 IFNA1P01562 189 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 NDUFV2P19404 249 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 PXKQ7Z7A4 578 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 GLIS1Q8NBF1 620 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 NANOS1Q8WY41 292 aaKnown RBP11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 SLC45A3Q96JT2 553 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 OR2B2Q9GZK3 357 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 CCM2LQ9NUG4 571 aaPredicted RBP11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 TAS2R8Q9NYW2 309 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 MGAT4CQ9UBM8 478 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 WDR37Q9Y2I8 494 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 ANKRD36A6QL64 1941 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 A0A1W2PPK0 400 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 A6NCN8 305 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 PRAMEF2O60811 474 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 APOFQ13790 326 aa11.92□□□□□ -0.5
RAB3IP-212ENST00000550536 KANK2Q63ZY3 851 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms