RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ZNF225Q9UK10 706 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 C1orf226A1L170 272 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 KDM4EB2RXH2 506 aaPredicted RBP15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 POC1B-GALNT4F8VUJ3 575 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 SNX4O95219 450 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 PDYNP01213 254 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 HPNP05981 417 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 ABCD3P28288 659 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 CASP3P42574 277 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 CDK9P50750 372 aaKnown RBP15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 WNT3P56703 355 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 NRG3P56975 720 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 DUSP2Q05923 314 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 MGAT2Q10469 447 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 FAM111BQ6SJ93 734 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 UHMK1Q8TAS1 419 aaKnown RBP15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 TRPC4APQ8TEL6 797 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 SELENOMQ8WWX9 145 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 IFT81Q8WYA0 676 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 TMEM41AQ96HV5 264 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 HBEGFQ99075 208 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 ITPAQ9BY32 194 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 PRDM14Q9GZV8 571 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 BRF2Q9HAW0 419 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 TRPS1Q9UHF7 1281 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 ZNF639Q9UID6 485 aa15.92■□□□□ 0.14
CHMP1A-205ENST00000548650 HRNRQ86YZ3 2850 aaPredicted RBP15.91■□□□□ 0.14
CHMP1A-205ENST00000548650 GOLGA6L10A6NI86 522 aa15.91■□□□□ 0.14
CHMP1A-205ENST00000548650 PPM1BO75688 479 aa15.91■□□□□ 0.14
CHMP1A-205ENST00000548650 MASP1P48740 699 aa15.91■□□□□ 0.14
CHMP1A-205ENST00000548650 EXOSC7Q15024 291 aaKnown RBP15.91■□□□□ 0.14
CHMP1A-205ENST00000548650 TCHHL1Q5QJ38 904 aaPredicted RBP15.91■□□□□ 0.14
CHMP1A-205ENST00000548650 C1orf52Q8N6N3 182 aaKnown RBP15.91■□□□□ 0.14
CHMP1A-205ENST00000548650 SIMC1Q8NDZ2 872 aa15.91■□□□□ 0.14
CHMP1A-205ENST00000548650 TM4SF18Q96CE8 201 aa15.91■□□□□ 0.14
CHMP1A-205ENST00000548650 KLHL29Q96CT2 875 aa15.91■□□□□ 0.14
CHMP1A-205ENST00000548650 BRINP2Q9C0B6 783 aa15.91■□□□□ 0.14
CHMP1A-205ENST00000548650 SNX6Q9UNH7 406 aa15.91■□□□□ 0.14
CHMP1A-205ENST00000548650 A0A087WUV0 522 aaPredicted RBP15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 HSPB2A8KAH6 182 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 GUCY1B2O75343 617 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 ERAL1O75616 437 aaKnown RBP15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 OR4F21O95013 312 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 ZWINTO95229 277 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 EPPINO95925 133 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 CBX7O95931 251 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 ABCB1P08183 1280 aaPredicted RBP15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 CSNK2A2P19784 350 aaPredicted RBP15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 GCAP28676 217 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 PTPN6P29350 595 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 FEN1P39748 380 aaKnown RBP15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 RIPPLY3P57055 190 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 RPP38P78345 283 aaKnown RBP15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 MAP4K2Q12851 820 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 LTB4RQ15722 352 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 HSPB2Q16082 182 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 NHSL2Q5HYW2 709 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 DCST1Q5T197 706 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 CES4AQ5XG92 561 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 DESI1Q6ICB0 168 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 TMEM81Q6P7N7 255 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 PACS2Q86VP3 889 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 LACC1Q8IV20 430 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 TNIP2Q8NFZ5 429 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 NRGNQ92686 78 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 HGDQ93099 445 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 CTHRC1Q96CG8 243 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 ZNF681Q96N22 645 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 GNRHR2Q96P88 292 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 TMEM237Q96Q45 408 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 TIMP4Q99727 224 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 SH3GL2Q99962 352 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 PLLPQ9Y342 182 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 SLC6A5Q9Y345 797 aa15.9■□□□□ 0.14
CHMP1A-205ENST00000548650 EXOC1LA0A1B0GW35 172 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 AHRRA9YTQ3 701 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 TRAPPC6AO75865 159 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 SNRPAP09012 282 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 NAGAP17050 411 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 KRT15P19012 456 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 BMP5P22003 454 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 CEACAM8P31997 349 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 CLCQ05315 142 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 SNTB1Q13884 538 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 EIPR1Q53HC9 387 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 TIGD3Q6B0B8 471 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 VASNQ6EMK4 673 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 FAM180BQ6P0A1 224 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 POMZP3Q6PJE2 187 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 ARSKQ6UWY0 536 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 CDYL2Q8N8U2 506 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 ADCY4Q8NFM4 1077 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 OMA1Q96E52 524 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 CNRIP1Q96F85 164 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 ZNF382Q96SR6 550 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 UGT2B28Q9BY64 529 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 METTL7AQ9H8H3 244 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 CFL2Q9Y281 166 aa15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 SETD2Q9BYW2 2564 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-205ENST00000548650 ITPR3Q14573 2671 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms