RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 LY6G6DO95868 133 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 HRGP04196 525 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 SLC35E2BP0CK96 405 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 SLC35E2P0CK97 266 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 CYP4B1P13584 511 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 CAV1Q03135 178 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 E2F2Q14209 437 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 ZKSCAN8Q15776 578 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 PFKFB4Q16877 469 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 MRM1Q6IN84 353 aaKnown RBP10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 FAM111BQ6SJ93 734 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 ZDHHC24Q6UX98 284 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 TBC1D1Q86TI0 1168 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 P3H2Q8IVL5 708 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 GCNT2Q8N0V5 402 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 CIARTQ8N365 385 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 ZNF441Q8N8Z8 693 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 MBD3L2Q8NHZ7 208 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 FBF1Q8TES7 1133 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 KCTD4Q8WVF5 259 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 ADIPOR1Q96A54 375 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 TP53INP1Q96A56 240 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 CDK15Q96Q40 435 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 NODALQ96S42 347 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 ATOH8Q96SQ7 321 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 TUBA1CQ9BQE3 449 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 ZNF717Q9BY31 904 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 BRINP2Q9C0B6 783 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 RAB17Q9H0T7 212 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 CXorf21Q9HAI6 301 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 GALNT9Q9HCQ5 603 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 GALNT8Q9NY28 637 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 EHD3Q9NZN3 535 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 C6orf203Q9P0P8 240 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 BCAP29Q9UHQ4 241 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 ADGRE2Q9UHX3 823 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 DTX4Q9Y2E6 619 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 RNF11Q9Y3C5 154 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 PCDHGA11Q9Y5H2 935 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 FLNAP21333 2647 aaKnown RBP10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 ABCA2Q9BZC7 2435 aa10.9□□□□□ -0.66
TRAFD1-205ENST00000548277 NIPBLQ6KC79 2804 aaeCLIP10.9□□□□□ -0.67
TRAFD1-205ENST00000548277 SH3D21A4FU49 640 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 H0Y3Z8 333 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 ABCB1P08183 1280 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 LTA4HP09960 611 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 GFAPP14136 432 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 ABCD3P28288 659 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 PCSK6P29122 969 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 PTPN6P29350 595 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 SERPINB1P30740 379 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 PIK3CBP42338 1070 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 XKP51811 444 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 RPP38P78345 283 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 PHEXP78562 749 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 IRF9Q00978 393 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 EXOSC7Q15024 291 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 TIGD3Q6B0B8 471 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 KRTAP1-3Q8IUG1 177 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 TRIM42Q8IWZ5 723 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 GALNT12Q8IXK2 581 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 ZNF615Q8N8J6 731 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 SIMC1Q8NDZ2 872 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 OR4K14Q8NGD5 310 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 OR14L1PQ8NHC6 308 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 NUDT8Q8WV74 236 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 NXF5Q9H1B4 397 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 DDX31Q9H8H2 851 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 CALHM2Q9HA72 323 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 SERHLQ9NQF3 203 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 JKAMPQ9P055 326 aa10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 CPSF2Q9P2I0 782 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-205ENST00000548277 ESYT3A0FGR9 886 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 KIAA1324LA8MWY0 1029 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 H7C1Q1 480 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 SNPHO15079 494 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 KERAO60938 352 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 ICOSLGO75144 302 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 ERAL1O75616 437 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 SMNDC1O75940 238 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 SIX3O95343 332 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 KLK1P06870 262 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 MTHFD2P13995 350 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 CNTFP26441 200 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 STX2P32856 288 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 CPOXP36551 454 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 FEN1P39748 380 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 TMED10P49755 219 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 SORDQ00796 357 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 SLC7A5Q01650 507 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 FUT7Q11130 342 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 GTF2H2Q13888 395 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 SGO1Q5FBB7 561 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 NHSL2Q5HYW2 709 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 C6orf163Q5TEZ5 329 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 SHEQ5VZ18 495 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 LIPJQ5W064 366 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 FAM180BQ6P0A1 224 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 GTF2H2CQ6P1K8 395 aa10.88□□□□□ -0.67
TRAFD1-205ENST00000548277 GOLGA7Q7Z5G4 137 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms