RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 LURAP1LQ8IV03 231 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 SAMD14Q8IZD0 417 aaPredicted RBP17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 OR5M3Q8NGP4 307 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 LILRB4Q8NHJ6 448 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 SPPL2AQ8TCT8 520 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 UBLCP1Q8WVY7 318 aaPredicted RBP17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 CNRIP1Q96F85 164 aaPredicted RBP17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 SPOCK3Q9BQ16 436 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 BRINP2Q9C0B6 783 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 SIRT5Q9NXA8 310 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 B4GALT7Q9UBV7 327 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 UTS2RQ9UKP6 389 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 ACAD8Q9UKU7 415 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 DLGAP4Q9Y2H0 992 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 TIMM22Q9Y584 194 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 APCP25054 2843 aa17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 PHF3Q92576 2039 aaKnown RBP17.13■□□□□ 0.33
CHMP1A-203ENST00000547614 C19orf84I3L1E1 186 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 PCDH7O60245 1069 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 CDH16O75309 829 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 PROCP04070 461 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 SHBGP04278 402 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 RFPL3SP0C7P2 107 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 KRT15P19012 456 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 ABCD3P28288 659 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 CHRNB4P30926 498 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 CRHR1P34998 444 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 SOX18P35713 384 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 KIR3DL1P43629 444 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 GSTM5P46439 218 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 HTR6P50406 440 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 FBXW4P57775 412 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 RAE1P78406 368 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 PMPCAQ10713 525 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 HEPACAMQ14CZ8 416 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 WLSQ5T9L3 541 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 FAM219BQ5XKK7 198 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 CCNYL1Q8N7R7 359 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 ACBD4Q8NC06 268 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 OR5M9Q8NGP3 310 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 RDH11Q8TC12 318 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 ERP27Q96DN0 273 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 HSPBAP1Q96EW2 488 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 ZNF597Q96LX8 424 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 ANGPTL4Q9BY76 406 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 SHCBP1LQ9BZQ2 653 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 ENKD1Q9H0I2 346 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 NXF5Q9H1B4 397 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 MID1IP1Q9NPA3 183 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 HEY2Q9UBP5 337 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 BCAP29Q9UHQ4 241 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 RNF6Q9Y252 685 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 PCDHGB3Q9Y5G1 929 aa17.12■□□□□ 0.33
CHMP1A-203ENST00000547614 GNG14A0A1W2PPG7 69 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 UBFD1O14562 309 aaKnown RBP17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 ACOX3O15254 700 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 PLIN3O60664 434 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 WDR1O75083 606 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 IL3P08700 152 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 DNAJB13P59910 316 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 DCAF7P61962 342 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 HMGCS1Q01581 520 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 TMEM81Q6P7N7 255 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 PACS2Q86VP3 889 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 SRRM1Q8IYB3 904 aaKnown RBP17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 RPRMLQ8N4K4 120 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 ADCY4Q8NFM4 1077 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 NEIL3Q8TAT5 605 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 ZNF675Q8TD23 568 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 NTNG2Q96CW9 530 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 APIPQ96GX9 242 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 LCORQ96JN0 433 aaPredicted RBP17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 JSRP1Q96MG2 331 aaPredicted RBP17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 EXO5Q9H790 373 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 EHD3Q9NZN3 535 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 PRODH2Q9UF12 536 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 DTX4Q9Y2E6 619 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 ADGRG4Q8IZF6 3080 aa17.11■□□□□ 0.33
CHMP1A-203ENST00000547614 PPM1BO75688 479 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 BCAS2O75934 225 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 CBX7O95931 251 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 ABCB1P08183 1280 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 SNRPB2P08579 225 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 GABRA1P14867 456 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 ENDOUP21128 410 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 DRD5P21918 477 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 TIA1P31483 386 aaKnown RBP eCLIP17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 CASP3P42574 277 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 PPICP45877 212 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 SLCO1A2P46721 670 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 NAGLUP54802 743 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 NUP107P57740 925 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 DUSP2Q05923 314 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 DUSP8Q13202 625 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 EXOSC7Q15024 291 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 TRMT12Q53H54 448 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 ZNF585AQ6P3V2 769 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 B3GNT6Q6ZMB0 384 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 FRMD7Q6ZUT3 714 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 NUP54Q7Z3B4 507 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms