RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 MCM8Q9UJA3 840 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 UTS2RQ9UKP6 389 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 CES1P1Q9UKY3 287 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 C15orf38-AP3S2A0A0A6YYH1 394 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 A0A1B0GTL3 188 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 A0A1W2PS29 197 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 NKX2-6A6NCS4 301 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 HSPB2A8KAH6 182 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 ACOX3O15254 700 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 PPM1BO75688 479 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 TRAPPC6AO75865 159 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 ABCB1P08183 1280 aaPredicted RBP8.59□□□□□ -1.03
YBX3-218ENST00000546298 CT62P0C5K7 136 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 RHOXF2BP0C7M4 288 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 S1PR1P21453 382 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 GPX3P22352 226 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 GCAP28676 217 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 PEX19P40855 299 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 CASP3P42574 277 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 FBXW4P57775 412 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 PSPHP78330 225 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 LCP2Q13094 533 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 SLC29A2Q14542 456 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 HEPACAMQ14CZ8 416 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 HSPB2Q16082 182 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 PRICKLE4Q2TBC4 344 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 SLC25A35Q3KQZ1 300 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 SPIN4Q56A73 249 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 RIPPLY2Q5TAB7 128 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 SLC30A6Q6NXT4 461 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 FAM111BQ6SJ93 734 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 RPS27LQ71UM5 84 aaKnown RBP8.59□□□□□ -1.03
YBX3-218ENST00000546298 RPRMLQ8N4K4 120 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 EIF1ADQ8N9N8 165 aaKnown RBP8.59□□□□□ -1.03
YBX3-218ENST00000546298 CTHRC1Q96CG8 243 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 ERP27Q96DN0 273 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 L3HYPDHQ96EM0 354 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 DTNBP1Q96EV8 351 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 LRRC46Q96FV0 321 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 LCORQ96JN0 433 aaPredicted RBP8.59□□□□□ -1.03
YBX3-218ENST00000546298 RILPQ96NA2 401 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 RHOXF2Q9BQY4 288 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 UCK2Q9BZX2 261 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 NXF5Q9H1B4 397 aaKnown RBP8.59□□□□□ -1.03
YBX3-218ENST00000546298 PPCSQ9HAB8 311 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 MCCC2Q9HCC0 563 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 MAT2BQ9NZL9 334 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 TNFRSF10DQ9UBN6 386 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 ZNF225Q9UK10 706 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 DLGAP4Q9Y2H0 992 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 FAM215AQ9Y5M1 114 aa8.59□□□□□ -1.03
YBX3-218ENST00000546298 COL12A1Q99715 3063 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 GNG14A0A1W2PPG7 69 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 GOLGA8RI6L899 631 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 PCDH7O60245 1069 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 HPNP05981 417 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 PYGBP11216 843 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 IGFBP2P18065 325 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 ENDOUP21128 410 aaKnown RBP8.58□□□□□ -1.04
YBX3-218ENST00000546298 DRD5P21918 477 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 ABCD3P28288 659 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 MSX1P28360 303 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 PPICP45877 212 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 CCT5P48643 541 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 TRPC1P48995 793 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 CDK9P50750 372 aaKnown RBP8.58□□□□□ -1.04
YBX3-218ENST00000546298 PLCXD2Q0VAA5 305 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 MGAT2Q10469 447 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 DUSP8Q13202 625 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 SNTA1Q13424 505 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 ERCC6LQ2NKX8 1250 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 CES4AQ5XG92 561 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 RTL6Q6ICC9 239 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 HOMEZQ8IX15 550 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 PM20D2Q8IYS1 436 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 ULK2Q8IYT8 1036 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 PRR22Q8IZ63 422 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 CCNYL1Q8N7R7 359 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 OR52R1Q8NGF1 315 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 ZNF675Q8TD23 568 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 TMCO6Q96DC7 493 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 TRIM44Q96DX7 344 aaPredicted RBP8.58□□□□□ -1.04
YBX3-218ENST00000546298 OMA1Q96E52 524 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 TMEM41AQ96HV5 264 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 TMEM237Q96Q45 408 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 HBEGFQ99075 208 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 ITPAQ9BY32 194 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 SLC6A15Q9H2J7 730 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 METTL7AQ9H8H3 244 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 EHD3Q9NZN3 535 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 SPRR3Q9UBC9 169 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 KCNN3Q9UGI6 736 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 TBK1Q9UHD2 729 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 ZNF639Q9UID6 485 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 C15orf41Q9Y2V0 281 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 WBP11Q9Y2W2 641 aaKnown RBP8.58□□□□□ -1.04
YBX3-218ENST00000546298 PCNX1Q96RV3 2341 aa8.58□□□□□ -1.04
YBX3-218ENST00000546298 PKDREJQ9NTG1 2253 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 A0A0G2JNJ9 132 aa8.57□□□□□ -1.04
YBX3-218ENST00000546298 SERTM1A2A2V5 107 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms