RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SHEQ5VZ18 495 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 ZNF776Q68DI1 518 aaPredicted RBP3.21□□□□□ -1.9
SNHG1-224ENST00000545688 MOB2Q70IA6 237 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 CACUL1Q86Y37 369 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 SAMD12Q8N8I0 201 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 DCPSQ96C86 337 aaKnown RBP3.21□□□□□ -1.9
SNHG1-224ENST00000545688 NTNG2Q96CW9 530 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 ZNF274Q96GC6 653 aaPredicted RBP3.21□□□□□ -1.9
SNHG1-224ENST00000545688 MAPKAP1Q9BPZ7 522 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 INPP5KQ9BT40 448 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 NT5DC2Q9H857 520 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 GMEB2Q9UKD1 530 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 NCOR1O75376 2440 aa3.21□□□□□ -1.9
SNHG1-224ENST00000545688 ABCC4O15439 1325 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 CCDC162PA2VCL2 907 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 MCF2LO15068 1137 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 LYNP07948 512 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 FHP07954 510 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 GPX3P22352 226 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 TIA1P31483 386 aaKnown RBP eCLIP3.2□□□□□ -1.94e-6■■■■□ 22.9
SNHG1-224ENST00000545688 MDH2P40926 338 aaKnown RBP3.2□□□□□ -1.9
SNHG1-224ENST00000545688 TNFRSF4P43489 277 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 CDO1Q16878 200 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 GSG1Q2KHT4 349 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 LRIT3Q3SXY7 679 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 ZNF730Q6ZMV8 503 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 TTC5Q8N0Z6 440 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 ZNF491Q8N8L2 437 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 ERO1AQ96HE7 468 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 ZBED3Q96IU2 234 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-224ENST00000545688 CDHR1Q96JP9 859 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 ZNF285Q96NJ3 590 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 PAXXQ9BUH6 204 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 VIPAS39Q9H9C1 493 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 NKIRAS2Q9NYR9 191 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 ADAM22Q9P0K1 906 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 PLEKHA6Q9Y2H5 1048 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 SSC5DA1L4H1 1573 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 KDM3BQ7LBC6 1761 aa3.2□□□□□ -1.9
SNHG1-224ENST00000545688 MAP3K15Q6ZN16 1313 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 ANKDD1BA6NHY2 528 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 SAP18O00422 153 aaKnown RBP3.19□□□□□ -1.9
SNHG1-224ENST00000545688 TNFSF11O14788 317 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 FAM58BPP0C7Q3 252 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 ELK1P19419 428 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 PPP2R1AP30153 589 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 FHITP49789 147 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 SPATA21Q7Z572 469 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 TIGD4Q8IY51 512 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 DEFB123Q8N688 67 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 RNF149Q8NC42 400 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 SEPT8Q92599 483 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 RBM18Q96H35 190 aaKnown RBP3.19□□□□□ -1.9
SNHG1-224ENST00000545688 TMED7Q9Y3B3 224 aa3.19□□□□□ -1.9
SNHG1-224ENST00000545688 SIPA1L3O60292 1781 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-224ENST00000545688 C5orf52A6NGY3 159 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 GRAP2O75791 330 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 HMOX1P09601 288 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 GDF1P27539 372 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 TNNT2P45379 298 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-224ENST00000545688 TOMM20Q15388 145 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 PARP10Q53GL7 1025 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 C9orf129Q5T035 196 aaKnown RBP3.18□□□□□ -1.9
SNHG1-224ENST00000545688 LYPLAL1Q5VWZ2 237 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 Q7L0L9 218 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 ANKRD46Q86W74 232 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 UBQLNLQ8IYU4 475 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 EXOC4Q96A65 974 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 BSCL2Q96G97 398 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-224ENST00000545688 GUCD1Q96NT3 240 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 DBNDD1Q9H9R9 158 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 AMBNQ9NP70 447 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 ZNF319Q9P2F9 582 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 RCOR3Q9P2K3 495 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-224ENST00000545688 ETV7Q9Y603 341 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 SCN9AQ15858 1988 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 PFASO15067 1338 aa3.18□□□□□ -1.9
SNHG1-224ENST00000545688 LAMB1P07942 1786 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 LRRC37AA6NMS7 1700 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 CLN5O75503 358 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 RPN1P04843 607 aaKnown RBP3.17□□□□□ -1.9
SNHG1-224ENST00000545688 VIMP08670 466 aaKnown RBP3.17□□□□□ -1.9
SNHG1-224ENST00000545688 CCDC159P0C7I6 412 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 FOSL2P15408 326 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 GJB2P29033 226 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 PRKCIP41743 596 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 PRMT2P55345 433 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 FOLH1Q04609 750 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 TEFQ10587 303 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 LSMEM1Q8N8F7 131 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 CCDC191Q8NCU4 936 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 Q8NFD4 153 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 TBCKQ8TEA7 893 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 U2AF1L4Q8WU68 220 aaKnown RBP3.17□□□□□ -1.9
SNHG1-224ENST00000545688 ERGIC2Q96RQ1 377 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 OR10A4Q9H209 315 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 ZNF665Q9H7R5 613 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 MINDY3Q9H8M7 445 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 MYOZ2Q9NPC6 264 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms